Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Synj1 synaptojanin 1 [ Mus musculus (house mouse) ]

    Gene ID: 104015, updated on 8-Jul-2021

    Summary

    Official Symbol
    Synj1provided by MGI
    Official Full Name
    synaptojanin 1provided by MGI
    Primary source
    MGI:MGI:1354961
    See related
    Ensembl:ENSMUSG00000022973
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA675315; mKIAA0910; A930006D20Rik
    Expression
    Broad expression in frontal lobe adult (RPKM 17.6), cortex adult (RPKM 16.9) and 26 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Synj1 in Genome Data Viewer
    Location:
    16; 16 C3.3
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (90732980..90810543, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (90936092..91013727, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (90936342..91011553, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene eva-1 homolog C (C. elegans) Neighboring gene predicted gene, 36363 Neighboring gene uncharacterized LOC118568232 Neighboring gene cilia and flagella associate protien 298 Neighboring gene RIKEN cDNA 4930404I05 gene Neighboring gene PAX3 and PAX7 binding protein 1 Neighboring gene RIKEN cDNA 4932438H23 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in brain development IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in inositol phosphate dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within inositol phosphate dephosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within learning IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in learning ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within neurotransmitter transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phosphatidylinositol dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within phosphatidylinositol dephosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phosphatidylinositol dephosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within phosphatidylinositol metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within phosphatidylinositol metabolic process TAS
    Traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within phosphatidylinositol-mediated signaling TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of endosome organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of gliogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of receptor-mediated endocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of synaptic vesicle recycling TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in postsynaptic neurotransmitter receptor internalization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of postsynaptic neurotransmitter receptor internalization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of postsynaptic neurotransmitter receptor internalization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to cytokine ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to retinoic acid ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in synaptic vesicle endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within synaptic vesicle endocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in synaptic vesicle endocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within synaptic vesicle priming IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within synaptic vesicle transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in synaptic vesicle uncoating IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within synaptic vesicle uncoating IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in synaptic vesicle uncoating IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in Schaffer collateral - CA1 synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Schaffer collateral - CA1 synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Schaffer collateral - CA1 synapse IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    part_of clathrin coat TAS
    Traceable Author Statement
    more info
    PubMed 
    part_of clathrin coat of coated pit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in glutamatergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in glutamatergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in glutamatergic synapse IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    part_of membrane coat IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with microtubule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    located_in parallel fiber to Purkinje cell synapse ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in perinuclear region of cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in presynapse IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in presynapse ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in synaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    synaptojanin-1
    Names
    synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1
    NP_001038980.1
    NP_001157955.1
    XP_006522900.1
    XP_006522909.1
    XP_011244377.1
    XP_011244378.1
    XP_011244379.1
    XP_011244380.1
    XP_011244381.1
    XP_011244382.1
    XP_011244383.1
    XP_011244384.1
    XP_011244385.1
    XP_011244386.1
    XP_011244387.1
    XP_011244389.1
    XP_011244390.1
    XP_011244391.1
    XP_017172325.1
    XP_017172326.1
    XP_017172327.1
    XP_017172328.1
    XP_017172329.1
    XP_017172330.1
    XP_030104762.1
    XP_030104763.1
    XP_030104764.1
    XP_030104765.1
    XP_030104766.1
    XP_030104767.1
    XP_030104768.1
    XP_030104769.1
    XP_030104770.1
    XP_036015603.1
    XP_036015604.1
    XP_036015605.1
    XP_036015606.1
    XP_036015607.1
    XP_036015608.1
    XP_036015609.1
    XP_036015610.1
    XP_036015611.1
    XP_036015612.1
    XP_036015613.1
    XP_036015614.1
    XP_036015615.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045515.1NP_001038980.1  synaptojanin-1 isoform b

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) represents use of an alternate promoter and 5' UTR, uses a downstream start codon, and includes an alternate exon in the 3' coding region resulting in a frameshift, compared to variant 1. The resulting isoform (b) has a shorter N-terminus and a shorter and distinct C-terminus, compared to isoform a.
      Source sequence(s)
      AB093272, CJ048086, CJ104552
      Consensus CDS
      CCDS49906.1
      UniProtKB/TrEMBL
      E9Q7S0
      Related
      ENSMUSP00000128997.2, ENSMUST00000170853.8
      Conserved Domains (3) summary
      cd09098
      Location:533868
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      pfam02383
      Location:60340
      Syja_N; SacI homology domain
      cl17169
      Location:8671008
      RRM_SF; RNA recognition motif (RRM) superfamily
    2. NM_001164483.1NP_001157955.1  synaptojanin-1 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
      Source sequence(s)
      AC134560, AK080946, AW045957, BU703932, BY267025, CF741221, CV558169, CX239305, EL606634
      Consensus CDS
      CCDS49907.1
      UniProtKB/TrEMBL
      D3Z656
      Related
      ENSMUSP00000113308.2, ENSMUST00000121759.8
      Conserved Domains (3) summary
      cd09098
      Location:573908
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      pfam02383
      Location:100380
      Syja_N; SacI homology domain
      cl17169
      Location:9071048
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      90732980..90810543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030248904.2XP_030104764.1  synaptojanin-1 isoform X16

      Conserved Domains (4) summary
      cd09098
      Location:6691004
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11461536
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10031144
      RRM_SF; RNA recognition motif (RRM) superfamily
    2. XM_036159720.1XP_036015613.1  synaptojanin-1 isoform X40

      Conserved Domains (4) summary
      cd09098
      Location:6691004
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      PRK12323
      Location:11661368
      PRK12323; DNA polymerase III subunit gamma/tau
      cl17169
      Location:10031144
      RRM_SF; RNA recognition motif (RRM) superfamily
    3. XM_036159719.1XP_036015612.1  synaptojanin-1 isoform X39

      Conserved Domains (4) summary
      cd09098
      Location:6691004
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      PRK12323
      Location:11661368
      PRK12323; DNA polymerase III subunit gamma/tau
      cl17169
      Location:10031144
      RRM_SF; RNA recognition motif (RRM) superfamily
    4. XM_036159711.1XP_036015604.1  synaptojanin-1 isoform X12

      Conserved Domains (4) summary
      cd09098
      Location:6691004
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:11961569
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10031144
      RRM_SF; RNA recognition motif (RRM) superfamily
    5. XM_030248902.2XP_030104762.1  synaptojanin-1 isoform X3

      Conserved Domains (4) summary
      cd09098
      Location:6691004
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:11961598
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10031144
      RRM_SF; RNA recognition motif (RRM) superfamily
    6. XM_036159715.1XP_036015608.1  synaptojanin-1 isoform X28

      Conserved Domains (4) summary
      cd09098
      Location:6691004
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:11081412
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10031144
      RRM_SF; RNA recognition motif (RRM) superfamily
    7. XM_036159712.1XP_036015605.1  synaptojanin-1 isoform X14

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11541544
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    8. XM_017316840.3XP_017172329.1  synaptojanin-1 isoform X37

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11541378
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    9. XM_030248903.2XP_030104763.1  synaptojanin-1 isoform X9

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11541557
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    10. XM_036159718.1XP_036015611.1  synaptojanin-1 isoform X34

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      PRK07764
      Location:11971391
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    11. XM_017316836.3XP_017172325.1  synaptojanin-1 isoform X10

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:12041577
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    12. XM_006522837.5XP_006522900.1  synaptojanin-1 isoform X6

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11541570
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    13. XM_036159716.1XP_036015609.1  synaptojanin-1 isoform X30

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:11711405
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    14. XM_017316838.3XP_017172327.1  synaptojanin-1 isoform X29

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:11711405
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    15. XM_030248907.2XP_030104767.1  synaptojanin-1 isoform X27

      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:11161420
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    16. XM_011246088.4XP_011244390.1  synaptojanin-1 isoform X26

      Related
      ENSMUSP00000113518.3, ENSMUST00000118390.10
      Conserved Domains (4) summary
      cd09098
      Location:6771012
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:11161420
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:204624
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10111152
      RRM_SF; RNA recognition motif (RRM) superfamily
    17. XM_011246082.4XP_011244384.1  synaptojanin-1 isoform X15

      Conserved Domains (4) summary
      cd09098
      Location:6721007
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11491539
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10061147
      RRM_SF; RNA recognition motif (RRM) superfamily
    18. XM_017316841.3XP_017172330.1  synaptojanin-1 isoform X38

      Conserved Domains (4) summary
      cd09098
      Location:6721007
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11491373
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10061147
      RRM_SF; RNA recognition motif (RRM) superfamily
    19. XM_036159710.1XP_036015603.1  synaptojanin-1 isoform X11

      Conserved Domains (4) summary
      cd09098
      Location:6721007
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11721552
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10061147
      RRM_SF; RNA recognition motif (RRM) superfamily
    20. XM_011246076.4XP_011244378.1  synaptojanin-1 isoform X2

      Conserved Domains (4) summary
      cd09098
      Location:6721007
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:11991601
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10061147
      RRM_SF; RNA recognition motif (RRM) superfamily
    21. XM_011246081.4XP_011244383.1  synaptojanin-1 isoform X13

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11571547
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    22. XM_030248910.2XP_030104770.1  synaptojanin-1 isoform X36

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11571381
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    23. XM_017316839.3XP_017172328.1  synaptojanin-1 isoform X35

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11571381
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    24. XM_011246079.4XP_011244381.1  synaptojanin-1 isoform X7

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11571560
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    25. XM_030248908.2XP_030104768.1  synaptojanin-1 isoform X31

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      PRK07764
      Location:12001394
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    26. XM_011246077.4XP_011244379.1  synaptojanin-1 isoform X4

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11571576
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    27. XM_011246080.4XP_011244382.1  synaptojanin-1 isoform X8

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:12071580
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    28. XM_036159717.1XP_036015610.1  synaptojanin-1 isoform X33

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:12011424
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    29. XM_030248909.2XP_030104769.1  synaptojanin-1 isoform X32

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:12011397
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    30. XM_011246078.4XP_011244380.1  synaptojanin-1 isoform X5

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:11571573
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    31. XM_011246075.4XP_011244377.1  synaptojanin-1 isoform X1

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:12071609
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    32. XM_011246085.4XP_011244387.1  synaptojanin-1 isoform X24

      See identical proteins and their annotated locations for XP_011244387.1

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:11191423
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    33. XM_017316837.3XP_017172326.1  synaptojanin-1 isoform X23

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:11191423
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily
    34. XM_036159722.1XP_036015615.1  synaptojanin-1 isoform X42

      Conserved Domains (4) summary
      cd09098
      Location:533868
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:10271261
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:60480
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:8671008
      RRM_SF; RNA recognition motif (RRM) superfamily
    35. XM_030248905.2XP_030104765.1  synaptojanin-1 isoform X18

      Conserved Domains (4) summary
      cd09098
      Location:533868
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:10601462
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:60480
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:8671008
      RRM_SF; RNA recognition motif (RRM) superfamily
    36. XM_036159721.1XP_036015614.1  synaptojanin-1 isoform X41

      Conserved Domains (4) summary
      cd09098
      Location:533868
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:9721276
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:60480
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:8671008
      RRM_SF; RNA recognition motif (RRM) superfamily
    37. XM_036159714.1XP_036015607.1  synaptojanin-1 isoform X22

      Conserved Domains (4) summary
      cd09098
      Location:525860
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:60480
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:10021392
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:8591000
      RRM_SF; RNA recognition motif (RRM) superfamily
    38. XM_030248906.1XP_030104766.1  synaptojanin-1 isoform X20

      Conserved Domains (4) summary
      cd09098
      Location:525860
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:10521454
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:60480
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:8591000
      RRM_SF; RNA recognition motif (RRM) superfamily
    39. XM_036159713.1XP_036015606.1  synaptojanin-1 isoform X21

      Conserved Domains (4) summary
      cd09098
      Location:528863
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      COG5329
      Location:60483
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      pfam03154
      Location:10051395
      Atrophin-1; Atrophin-1 family
      cl17169
      Location:8621003
      RRM_SF; RNA recognition motif (RRM) superfamily
    40. XM_011246084.1XP_011244386.1  synaptojanin-1 isoform X19

      Conserved Domains (4) summary
      cd09098
      Location:528863
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:10551457
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:60483
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:8621003
      RRM_SF; RNA recognition motif (RRM) superfamily
    41. XM_011246083.1XP_011244385.1  synaptojanin-1 isoform X17

      Conserved Domains (4) summary
      cd09098
      Location:536871
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:10631465
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:60483
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:8701011
      RRM_SF; RNA recognition motif (RRM) superfamily
    42. XM_011246089.4XP_011244391.1  synaptojanin-1 isoform X43

      Conserved Domains (4) summary
      cd09098
      Location:86421
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:6071015
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:233
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:420561
      RRM_SF; RNA recognition motif (RRM) superfamily
    43. XM_006522846.4XP_006522909.1  synaptojanin-1 isoform X44

      Conserved Domains (3) summary
      cd09098
      Location:14349
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03247
      Location:535943
      PHA03247; large tegument protein UL36; Provisional
      cl17169
      Location:348489
      RRM_SF; RNA recognition motif (RRM) superfamily
    44. XM_011246087.4XP_011244389.1  synaptojanin-1 isoform X25

      Conserved Domains (4) summary
      cd09098
      Location:6801015
      INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
      PHA03378
      Location:11191423
      PHA03378; EBNA-3B; Provisional
      COG5329
      Location:204627
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
      cl17169
      Location:10141155
      RRM_SF; RNA recognition motif (RRM) superfamily

    RNA

    1. XR_876128.4 RNA Sequence

    2. XR_004939141.1 RNA Sequence

    3. XR_004939140.1 RNA Sequence

    Support Center