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    Heatr6 HEAT repeat containing 6 [ Mus musculus (house mouse) ]

    Gene ID: 217026, updated on 23-Jun-2021

    Summary

    Official Symbol
    Heatr6provided by MGI
    Official Full Name
    HEAT repeat containing 6provided by MGI
    Primary source
    MGI:MGI:1919790
    See related
    Ensembl:ENSMUSG00000000976
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BB135312; BB249351; 2700008B19Rik
    Expression
    Ubiquitous expression in CNS E14 (RPKM 7.8), whole brain E14.5 (RPKM 7.8) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Heatr6 in Genome Data Viewer
    Location:
    11; 11 C
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (83644463..83674580)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (83753637..83783754)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (83567139..83597256)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene WAP four-disulfide core domain 18 Neighboring gene WAP four-disulfide core domain 21 Neighboring gene COMM domain containing 9 pseudogene Neighboring gene predicted gene, 38934

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ22087

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    HEAT repeat-containing protein 6

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145432.3NP_663407.2  HEAT repeat-containing protein 6

      See identical proteins and their annotated locations for NP_663407.2

      Status: VALIDATED

      Source sequence(s)
      AA183118, AK132494, AK138219, BC065092, DV657360
      Consensus CDS
      CCDS36259.1
      UniProtKB/Swiss-Prot
      Q6P1G0
      Related
      ENSMUSP00000001002.8, ENSMUST00000001002.8
      Conserved Domains (2) summary
      pfam13251
      Location:421602
      DUF4042; Domain of unknown function (DUF4042)
      sd00044
      Location:817846
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      83644463..83674580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017314468.2XP_017169957.1  HEAT repeat-containing protein 6 isoform X2

      Conserved Domains (2) summary
      sd00044
      Location:353382
      HEAT; HEAT repeat [structural motif]
      pfam13251
      Location:1138
      DUF4042; Domain of unknown function (DUF4042)
    2. XM_030245843.1XP_030101703.1  HEAT repeat-containing protein 6 isoform X1

      Conserved Domains (2) summary
      sd00044
      Location:467496
      HEAT; HEAT repeat [structural motif]
      pfam13251
      Location:71252
      DUF4042; Domain of unknown function (DUF4042)
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