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    Gm20754 predicted gene, 20754 [ Mus musculus (house mouse) ]

    Gene ID: 626082, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm20754provided by MGI
    Official Full Name
    predicted gene, 20754provided by MGI
    Primary source
    MGI:MGI:5434110
    See related
    Ensembl:ENSMUSG00000103428 AllianceGenome:MGI:5434110
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in CNS E18 (RPKM 1.0), cortex adult (RPKM 0.7) and 3 other tissues See more
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    Genomic context

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    Location:
    3; 3 E3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (72973684..73502163)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (73066351..73594830)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07953 Neighboring gene sucrase isomaltase Neighboring gene SLIT and NTRK-like family, member 3 Neighboring gene STARR-seq mESC enhancer starr_07954 Neighboring gene STARR-seq mESC enhancer starr_07955 Neighboring gene STARR-seq mESC enhancer starr_07956 Neighboring gene RIKEN cDNA 4930509J09 gene Neighboring gene STARR-seq mESC enhancer starr_07957 Neighboring gene STARR-seq mESC enhancer starr_07958 Neighboring gene STARR-seq mESC enhancer starr_07959 Neighboring gene STARR-seq mESC enhancer starr_07960 Neighboring gene STARR-seq mESC enhancer starr_07961 Neighboring gene butyrylcholinesterase Neighboring gene STARR-seq mESC enhancer starr_07962 Neighboring gene STARR-seq mESC enhancer starr_07963 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. LncRNA RUS shapes the gene expression program towards neurogenesis. Schneider MF, et al. Life Sci Alliance, 2022 Oct. PMID 35688487, Free PMC Article
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040557.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AC160470, AK044425
      Related
      ENSMUST00000192642.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      72973684..73502163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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