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    Hoxb5os homeobox B5 and homeobox B6, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 75395, updated on 5-Mar-2024

    Summary

    Official Symbol
    Hoxb5osprovided by MGI
    Official Full Name
    homeobox B5 and homeobox B6, opposite strandprovided by MGI
    Primary source
    MGI:MGI:1922645
    See related
    Ensembl:ENSMUSG00000085645 AllianceGenome:MGI:1922645
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hoxb5/6as; 0610040B09Rik
    Summary
    Enables histone binding activity. Part of histone methyltransferase complex. Is expressed in early tubule; late tubule; and renal vasculature. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in kidney adult (RPKM 11.8), adrenal adult (RPKM 11.5) and 10 other tissues See more
    Orthologs
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    Genomic context

    See Hoxb5os in Genome Data Viewer
    Location:
    11 D; 11 59.82 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (96181863..96197736, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (96291037..96306910, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene homeobox B8 Neighboring gene STARR-seq mESC enhancer starr_30545 Neighboring gene homeobox B7 Neighboring gene homeobox B6 Neighboring gene homeobox B5 Neighboring gene homeobox B3 Neighboring gene Hoxb locus associated lincRNA Neighboring gene microRNA 10a Neighboring gene homeobox B4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_131758.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AK002860
      Related
      ENSMUST00000150698.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      96181863..96197736 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)