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    Crisp3 cysteine-rich secretory protein 3 [ Mus musculus (house mouse) ]

    Gene ID: 11572, updated on 23-Jun-2021

    Summary

    Official Symbol
    Crisp3provided by MGI
    Official Full Name
    cysteine-rich secretory protein 3provided by MGI
    Primary source
    MGI:MGI:102552
    See related
    Ensembl:ENSMUSG00000025433
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CR; Aeg; CRI; SGP; Aeg2; CRS3; SGP28; CRISP-3
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Crisp3 in Genome Data Viewer
    Location:
    17 B2; 17 19.45 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (40532668..40553179, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (40221777..40242288, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (40358726..40379207, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene TGFB-induced factor homeobox 2, pseudogene 2 Neighboring gene phosphoglycerate kinase 2 Neighboring gene cysteine-rich secretory protein 1 Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in specific granule ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cysteine-rich secretory protein 3
    Names
    SCP 2
    acidic epididymal glycoprotein 2
    sperm-coating glycoprotein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009639.3NP_033769.1  cysteine-rich secretory protein 3 precursor

      See identical proteins and their annotated locations for NP_033769.1

      Status: VALIDATED

      Source sequence(s)
      CV307357, L05560
      Consensus CDS
      CCDS28783.1
      UniProtKB/Swiss-Prot
      Q03402
      Related
      ENSMUSP00000026499.6, ENSMUST00000026499.6
      Conserved Domains (2) summary
      pfam08562
      Location:194241
      Crisp; Crisp
      cl00133
      Location:37172
      SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      40532668..40553179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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