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    Phf8l PHD finger protein 8 like [ Mus musculus (house mouse) ]

    Gene ID: 74042, updated on 8-Feb-2024

    Summary

    Official Symbol
    Phf8lprovided by MGI
    Official Full Name
    PHD finger protein 8 likeprovided by MGI
    Primary source
    MGI:MGI:1921292
    See related
    Ensembl:ENSMUSG00000121761 AllianceGenome:MGI:1921292
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PHF8; Phf8-ps; 4921501E09Rik
    Summary
    Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability Siderius type. Orthologous to human PHF8 (PHD finger protein 8). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Phf8l in Genome Data Viewer
    Location:
    17 B1; 17 17.98 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (33283117..33287014, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (33064143..33068040, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 952 Neighboring gene zinc finger protein 763 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:33170086-33170195 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:33170311-33170494 Neighboring gene STARR-seq mESC enhancer starr_42403 Neighboring gene STARR-positive B cell enhancer ABC_E4206 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:33226471-33226658 Neighboring gene zinc finger protein 563 Neighboring gene STARR-seq mESC enhancer starr_42404 Neighboring gene microrchidia 2B Neighboring gene predicted gene, 52288

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • Histone lysine demethylase PHF8
    • KIAA1111-like protein
    • PHD finger protein 8, pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_160433.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT033772
      Related
      ENSMUST00000234144.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      33283117..33287014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001009544.2: Suppressed sequence

      Description
      NM_001009544.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.