U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Zfp957 zinc finger protein 957 [ Mus musculus (house mouse) ]

    Gene ID: 105590, updated on 8-Feb-2024

    Summary

    Official Symbol
    Zfp957provided by MGI
    Official Full Name
    zinc finger protein 957provided by MGI
    Primary source
    MGI:MGI:2145729
    See related
    Ensembl:ENSMUSG00000071262 AllianceGenome:MGI:2145729
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in testis adult (RPKM 1.6), ovary adult (RPKM 0.2) and 5 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    14 D3; 14 42.56 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (79449795..79484807, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (79212355..79247367, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene von Willebrand factor A domain containing 8 Neighboring gene predicted gene, 18081 Neighboring gene predicted gene 4632 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79643421-79643608 Neighboring gene STARR-seq mESC enhancer starr_37253 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79667780-79667981 Neighboring gene STARR-seq mESC enhancer starr_37256 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79680321-79680522 Neighboring gene STARR-seq mESC enhancer starr_37257 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79691968-79692228 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:79693274-79693461 Neighboring gene regulator of cell cycle Neighboring gene STARR-positive B cell enhancer ABC_E11576 Neighboring gene N(alpha)-acetyltransferase 16, NatA auxiliary subunit

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC105590

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033215.3NP_001028387.1  uncharacterized protein LOC105590

      See identical proteins and their annotated locations for NP_001028387.1

      Status: VALIDATED

      Source sequence(s)
      AC139758
      Consensus CDS
      CCDS49551.1
      UniProtKB/TrEMBL
      B9EKX7, Q3UT76
      Related
      ENSMUSP00000124930.2, ENSMUST00000161649.9
      Conserved Domains (1) summary
      cl22851
      Location:469553
      PHD_SF; PHD finger superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      79449795..79484807 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)