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    Tbx3os2 T-box 3, opposite strand 2 [ Mus musculus (house mouse) ]

    Gene ID: 433944, updated on 8-Feb-2024

    Summary

    Official Symbol
    Tbx3os2provided by MGI
    Official Full Name
    T-box 3, opposite strand 2provided by MGI
    Primary source
    MGI:MGI:3801954
    See related
    Ensembl:ENSMUSG00000086847 AllianceGenome:MGI:3801954
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm16065
    Expression
    Biased expression in bladder adult (RPKM 2.9), large intestine adult (RPKM 1.3) and 6 other tissues See more
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    Genomic context

    Location:
    5 F; 5 60.35 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (119823153..119829283, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (119685088..119691218, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene T-box 3, opposite strand 1 Neighboring gene enhancer eA upstream of Tbx3 Neighboring gene predicted gene 16064 Neighboring gene STARR-seq mESC enhancer starr_14224 Neighboring gene T-box 3 Neighboring gene STARR-seq mESC enhancer starr_14227 Neighboring gene STARR-seq mESC enhancer starr_14229 Neighboring gene STARR-seq mESC enhancer starr_14230 Neighboring gene predicted gene, 42017 Neighboring gene T-box 5 Neighboring gene predicted gene 5563

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • Tbx3 oppopsite strand transcript 2

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040416.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC140675, AK083542
      Related
      ENSMUST00000135385.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      119823153..119829283 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)