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    PABPC1L2B-AS1 PABPC1L2B antisense RNA 1 (head to head) [ Homo sapiens (human) ]

    Gene ID: 101928345, updated on 10-Oct-2023

    Summary

    Official Symbol
    PABPC1L2B-AS1provided by HGNC
    Official Full Name
    PABPC1L2B antisense RNA 1 (head to head)provided by HGNC
    Primary source
    HGNC:HGNC:50345
    See related
    Ensembl:ENSG00000226725 AllianceGenome:HGNC:50345
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in prostate (RPKM 3.5), brain (RPKM 1.0) and 3 other tissues See more
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    Genomic context

    See PABPC1L2B-AS1 in Genome Data Viewer
    Location:
    Xq13.1-q13.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (72998388..73002856, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (71431896..71436357, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (72218227..72222695, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene DMRT like family C1 Neighboring gene family with sequence similarity 236 member A Neighboring gene family with sequence similarity 226 member A Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:72179367-72179868 Neighboring gene poly(A) binding protein cytoplasmic 1 like 2B Neighboring gene ReSE screen-validated silencer GRCh37_chrX:72288168-72288379 Neighboring gene poly(A) binding protein cytoplasmic 1 like 2A

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110398.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC234776
      Related
      ENST00000416989.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      72998388..73002856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      71431896..71436357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)