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    Smgc submandibular gland protein C [ Mus musculus (house mouse) ]

    Gene ID: 223809, updated on 8-Feb-2024

    Summary

    Official Symbol
    Smgcprovided by MGI
    Official Full Name
    submandibular gland protein Cprovided by MGI
    Primary source
    MGI:MGI:1859618
    See related
    Ensembl:ENSMUSG00000047295 AllianceGenome:MGI:1859618
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Muc19; Sfc21; DXImx49e; Muc19/Smgc; 2310010P21Rik
    Summary
    Predicted to be located in extracellular region. Is expressed in sublingual gland; sublingual gland epithelium; and submandibular gland. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Smgc in Genome Data Viewer
    Location:
    15 E3; 15 46.14 cM
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (91722531..91745633)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (91838328..91861435)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4147 Neighboring gene leucine-rich repeat kinase 2 Neighboring gene STARR-seq mESC enhancer starr_39505 Neighboring gene RAS related protein 1b pseudogene Neighboring gene STARR-seq mESC enhancer starr_39506 Neighboring gene STARR-seq mESC enhancer starr_39507 Neighboring gene mucin 19 Neighboring gene STARR-seq mESC enhancer starr_39508 Neighboring gene NADH dehydrogenase (ubiquinone) Fe-S protein 2 pseudogene Neighboring gene leucine-rich repeat LGI family, member 1 pseudogene

    Genomic regions, transcripts, and products

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    submandibular gland protein C
    Names
    mucin 19
    neonatal submandibular gland protein C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198927.3NP_945121.1  submandibular gland protein C precursor

      See identical proteins and their annotated locations for NP_945121.1

      Status: PROVISIONAL

      Source sequence(s)
      FQ976815
      Consensus CDS
      CCDS27762.1
      UniProtKB/Swiss-Prot
      A7UN65, Q3V1B0, Q58E46, Q6IS33, Q6JHY2, Q7TNU8, Q80ZH6
      UniProtKB/TrEMBL
      B9EHK5
      Related
      ENSMUSP00000085915.4, ENSMUST00000088555.10

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      91722531..91745633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)