U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Sult5a1 sulfotransferase family 5A, member 1 [ Mus musculus (house mouse) ]

    Gene ID: 57429, updated on 10-Feb-2024

    Summary

    Official Symbol
    Sult5a1provided by MGI
    Official Full Name
    sulfotransferase family 5A, member 1provided by MGI
    Primary source
    MGI:MGI:1931463
    See related
    Ensembl:ENSMUSG00000000739 AllianceGenome:MGI:1931463
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sultx1; Sult-x1
    Summary
    Predicted to enable sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver adult (RPKM 20.6), genital fat pad adult (RPKM 15.1) and 11 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    8 E1; 8 72.06 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (123869582..123885170, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (123142843..123158914, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13 Neighboring gene microRNA 7079 Neighboring gene copine VII Neighboring gene microRNA 7080 Neighboring gene predicted gene, 57791 Neighboring gene predicted gene 4316

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in sulfation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    sulfotransferase family 5A, member 1
    Names
    sulfotransferase related gene X1
    sulfotransferase-related protein SULT-X1
    NP_065589.2
    XP_006531293.1
    XP_006531294.3
    XP_006531295.3
    XP_030099560.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020564.3NP_065589.2  sulfotransferase family 5A, member 1

      See identical proteins and their annotated locations for NP_065589.2

      Status: VALIDATED

      Source sequence(s)
      CJ065192, CO044978
      Consensus CDS
      CCDS22749.1
      UniProtKB/TrEMBL
      O35402, Q91X36
      Related
      ENSMUSP00000000755.8, ENSMUST00000000755.15
      Conserved Domains (1) summary
      pfam00685
      Location:36283
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      123869582..123885170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531230.5XP_006531293.1  sulfotransferase family 5A, member 1 isoform X1

      See identical proteins and their annotated locations for XP_006531293.1

      UniProtKB/TrEMBL
      O35402, Q91X36
      Conserved Domains (1) summary
      pfam00685
      Location:36283
      Sulfotransfer_1; Sulfotransferase domain
    2. XM_030243700.2XP_030099560.1  sulfotransferase family 5A, member 1 isoform X4

      UniProtKB/TrEMBL
      Q3UQP7
      Related
      ENSMUSP00000123501.2, ENSMUST00000122819.8
      Conserved Domains (1) summary
      pfam00685
      Location:36171
      Sulfotransfer_1; Sulfotransferase domain
    3. XM_006531231.5XP_006531294.3  sulfotransferase family 5A, member 1 isoform X2

      UniProtKB/TrEMBL
      D3Z6D1
      Conserved Domains (1) summary
      pfam00685
      Location:36193
      Sulfotransfer_1; Sulfotransferase domain
    4. XM_006531232.5XP_006531295.3  sulfotransferase family 5A, member 1 isoform X3

      UniProtKB/TrEMBL
      D3Z6D1
      Related
      ENSMUSP00000122415.2, ENSMUST00000137998.2
      Conserved Domains (1) summary
      pfam00685
      Location:36193
      Sulfotransfer_1; Sulfotransferase domain

    RNA

    1. XR_003947321.2 RNA Sequence