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    Cracdl capping protein inhibiting regulator of actin like [ Mus musculus (house mouse) ]

    Gene ID: 72097, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cracdlprovided by MGI
    Official Full Name
    capping protein inhibiting regulator of actin likeprovided by MGI
    Primary source
    MGI:MGI:1919347
    See related
    Ensembl:ENSMUSG00000026090
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010300C02Rik
    Expression
    Biased expression in frontal lobe adult (RPKM 20.2), cortex adult (RPKM 19.8) and 11 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Cracdl in Genome Data Viewer
    Location:
    1; 1 B
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (37650757..37759170, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (37611676..37720089, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (37668521..37776656, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene mannoside acetylglucosaminyltransferase 4, isoenzyme A Neighboring gene G1 to S phase transition pseudogene Neighboring gene predicted gene, 39627 Neighboring gene RIKEN cDNA 4930556I23 gene Neighboring gene RIKEN cDNA 4930470B04 gene Neighboring gene predicted gene, 39628 Neighboring gene testis specific 10 Neighboring gene lipoyltransferase 1 Neighboring gene MIT, microtubule interacting and transport, domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028096.1NP_082372.1  CRACD-like protein

      Status: VALIDATED

      Source sequence(s)
      AC140321, BB048237, BC072639, BQ559383, CX123616
      Consensus CDS
      CCDS48242.1
      UniProtKB/TrEMBL
      E9Q3M9, Q6GQT3
      Related
      ENSMUSP00000123803.2, ENSMUST00000162875.8
      Conserved Domains (4) summary
      PTZ00436
      Location:500628
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:430818
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:6951039
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:145243
      DUF4592; Domain of unknown function (DUF4592)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      37650757..37759170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496296.4XP_006496359.1  CRACD-like protein isoform X4

      See identical proteins and their annotated locations for XP_006496359.1

      Conserved Domains (4) summary
      PTZ00436
      Location:500628
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:430818
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:6951039
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:145243
      DUF4592; Domain of unknown function (DUF4592)
    2. XM_006496295.5XP_006496358.1  CRACD-like protein isoform X4

      See identical proteins and their annotated locations for XP_006496358.1

      Conserved Domains (4) summary
      PTZ00436
      Location:500628
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:430818
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:6951039
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:145243
      DUF4592; Domain of unknown function (DUF4592)
    3. XM_006496297.3XP_006496360.1  CRACD-like protein isoform X4

      See identical proteins and their annotated locations for XP_006496360.1

      Conserved Domains (4) summary
      PTZ00436
      Location:500628
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:430818
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:6951039
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:145243
      DUF4592; Domain of unknown function (DUF4592)
    4. XM_036153695.1XP_036009588.1  CRACD-like protein isoform X3

      Conserved Domains (4) summary
      PTZ00436
      Location:522650
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:452840
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:7171061
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:167265
      DUF4592; Domain of unknown function (DUF4592)
    5. XM_036153696.1XP_036009589.1  CRACD-like protein isoform X5

      Conserved Domains (4) summary
      PTZ00436
      Location:500628
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:430818
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:6951039
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:145243
      DUF4592; Domain of unknown function (DUF4592)
    6. XM_006496292.5XP_006496355.2  CRACD-like protein isoform X2

      Conserved Domains (4) summary
      PTZ00436
      Location:528656
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:458846
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:7231067
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:173271
      DUF4592; Domain of unknown function (DUF4592)
    7. XM_006496291.5XP_006496354.2  CRACD-like protein isoform X1

      Conserved Domains (4) summary
      PTZ00436
      Location:528656
      PTZ00436; 60S ribosomal protein L19-like protein; Provisional
      PHA03307
      Location:458846
      PHA03307; transcriptional regulator ICP4; Provisional
      PRK07764
      Location:7231067
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam15262
      Location:173271
      DUF4592; Domain of unknown function (DUF4592)
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