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    Samd14 sterile alpha motif domain containing 14 [ Mus musculus (house mouse) ]

    Gene ID: 217125, updated on 23-Jun-2021

    Summary

    Official Symbol
    Samd14provided by MGI
    Official Full Name
    sterile alpha motif domain containing 14provided by MGI
    Primary source
    MGI:MGI:2384945
    See related
    Ensembl:ENSMUSG00000047181
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI839049; AI854782; BC034054
    Expression
    Broad expression in whole brain E14.5 (RPKM 45.4), CNS E14 (RPKM 40.9) and 21 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Samd14 in Genome Data Viewer
    Location:
    11; 11 D
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (94900213..94916913)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (95009395..95026087)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (94871193..94887401)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene sarcoglycan, alpha (dystrophin-associated glycoprotein) Neighboring gene H1.9 linker histone Neighboring gene protein phosphatase 1, regulatory subunit 9B Neighboring gene predicted gene, 51875 Neighboring gene pyruvate dehydrogenase kinase, isoenzyme 2 Neighboring gene predicted gene, 53200 Neighboring gene predicted gene 11513

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC31049

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in calcium-mediated signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in neuron projection development IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in dendrite IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in postsynaptic density IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    sterile alpha motif domain-containing protein 14
    Names
    SAM domain-containing protein 14

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001364135.1NP_001351064.1  sterile alpha motif domain-containing protein 14 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL606480
      Conserved Domains (2) summary
      cd09512
      Location:323388
      SAM_Neurabin-like; SAM domain of SAM_Neurabin-like subfamily
      cl28033
      Location:45236
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    2. NM_001364136.1NP_001351065.1  sterile alpha motif domain-containing protein 14 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL606480
      Conserved Domains (1) summary
      cd09512
      Location:255320
      SAM_Neurabin-like; SAM domain of SAM_Neurabin-like subfamily
    3. NM_146025.2NP_666137.1  sterile alpha motif domain-containing protein 14 isoform 2

      See identical proteins and their annotated locations for NP_666137.1

      Status: VALIDATED

      Source sequence(s)
      AI854782, AK049753, BC034054
      Consensus CDS
      CCDS25269.1
      UniProtKB/Swiss-Prot
      Q8K070
      Related
      ENSMUSP00000062231.4, ENSMUST00000055947.10
      Conserved Domains (2) summary
      cd09512
      Location:321386
      SAM_Neurabin-like; SAM domain of SAM_Neurabin-like subfamily
      smart00454
      Location:323386
      SAM; Sterile alpha motif

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      94900213..94916913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011248936.4XP_011247238.1  sterile alpha motif domain-containing protein 14 isoform X2

      Conserved Domains (2) summary
      PHA03307
      Location:45236
      PHA03307; transcriptional regulator ICP4; Provisional
      cl15755
      Location:317336
      SAM_superfamily; SAM (Sterile alpha motif )
    2. XM_030245857.2XP_030101717.1  sterile alpha motif domain-containing protein 14 isoform X3

      Conserved Domains (2) summary
      PHA03307
      Location:39234
      PHA03307; transcriptional regulator ICP4; Provisional
      cl15755
      Location:315334
      SAM_superfamily; SAM (Sterile alpha motif )
    3. XM_006533011.4XP_006533074.1  sterile alpha motif domain-containing protein 14 isoform X1

      Conserved Domains (1) summary
      cd09512
      Location:309374
      SAM_Neurabin-like; SAM domain of SAM_Neurabin-like subfamily
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