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    Fgl1 fibrinogen-like protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 234199, updated on 21-Apr-2024

    Summary

    Official Symbol
    Fgl1provided by MGI
    Official Full Name
    fibrinogen-like protein 1provided by MGI
    Primary source
    MGI:MGI:102795
    See related
    Ensembl:ENSMUSG00000031594 AllianceGenome:MGI:102795
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mfire1
    Summary
    Predicted to enable signaling receptor binding activity. Involved in negative regulation of T cell activation and regulation of immune response. Acts upstream of or within several processes, including adipose tissue development; cholesterol metabolic process; and response to stilbenoid. Located in extracellular region. Orthologous to human FGL1 (fibrinogen like 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward liver E18 (RPKM 174.3) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    8 A4; 8 23.89 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (41644471..41671015, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (41191434..41217978, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene mitochondrial tumor suppressor 1 Neighboring gene predicted gene 16193 Neighboring gene STARR-seq mESC enhancer starr_21283 Neighboring gene STARR-seq mESC enhancer starr_21286 Neighboring gene predicted gene, 39167 Neighboring gene STARR-seq mESC enhancer starr_21287 Neighboring gene STARR-seq mESC enhancer starr_21288 Neighboring gene predicted gene 16348 Neighboring gene pericentriolar material 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (3) 

    General gene information

    Markers

    Clone Names

    • MGC37822

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within adipose tissue development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell-matrix adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within cholesterol metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in hepatocyte proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of T cell activation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of T cell activation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in platelet aggregation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within regulation of glucose metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of immune response IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to stilbenoid IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in collagen-containing extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    fibrinogen-like protein 1
    Names
    MFIRE-1
    fibrinogen-related protein 1
    liver fibrinogen-related protein-1
    mfrep-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145594.2NP_663569.2  fibrinogen-like protein 1 precursor

      See identical proteins and their annotated locations for NP_663569.2

      Status: VALIDATED

      Source sequence(s)
      AC156554, AF478470
      Consensus CDS
      CCDS22260.1
      UniProtKB/Swiss-Prot
      Q71KU9, Q8VC25
      UniProtKB/TrEMBL
      A0A0R4J0E1
      Related
      ENSMUSP00000034003.5, ENSMUST00000034003.5
      Conserved Domains (1) summary
      cd00087
      Location:80306
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      41644471..41671015 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011242187.1XP_011240489.1  fibrinogen-like protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011240489.1

      UniProtKB/Swiss-Prot
      Q71KU9, Q8VC25
      UniProtKB/TrEMBL
      A0A0R4J0E1
      Conserved Domains (1) summary
      cd00087
      Location:80306
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    2. XM_011242188.4XP_011240490.1  fibrinogen-like protein 1 isoform X2

      Conserved Domains (1) summary
      cl00085
      Location:80199
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...