Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Bloc1s4provided by RGD
Official Full Name: biogenesis of lysosomal organelles complex 1 subunit 4provided by RGD
Primary source: RGD:1306037
See related: Ensembl:ENSRNOG00000054224 AllianceGenome:RGD:1306037
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Cno; RGD1306037
Summary: Predicted to be involved in anterograde synaptic vesicle transport. Predicted to act upstream of or within melanosome organization; neuromuscular process controlling balance; and platelet aggregation. Predicted to be located in cytoplasm. Predicted to be part of BLOC-1 complex. Orthologous to human BLOC1S4 (biogenesis of lysosomal organelles complex 1 subunit 4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: 14q21

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	14	NC_086032.1 (78267735..78269035)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	14	NC_051349.1 (74043025..74044325)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	14	NC_005113.4 (79013808..79015108)

Chromosome 14 - NC_086032.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in anterograde axonal transport	ISO Inferred from Sequence Orthology more info
involved_in anterograde synaptic vesicle transport	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within melanosome organization	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within neuromuscular process controlling balance	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within platelet aggregation	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
part_of BLOC-1 complex	IBA Inferred from Biological aspect of Ancestor more info
part_of BLOC-1 complex	ISO Inferred from Sequence Orthology more info
located_in axon cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: biogenesis of lysosome-related organelles complex 1 subunit 4

Names: biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.