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    Ahsg alpha-2-HS-glycoprotein [ Mus musculus (house mouse) ]

    Gene ID: 11625, updated on 11-Apr-2024

    Summary

    Official Symbol
    Ahsgprovided by MGI
    Official Full Name
    alpha-2-HS-glycoproteinprovided by MGI
    Primary source
    MGI:MGI:107189
    See related
    Ensembl:ENSMUSG00000022868 AllianceGenome:MGI:107189
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable endopeptidase inhibitor activity and receptor signaling protein tyrosine kinase inhibitor activity. Involved in negative regulation of bone mineralization. Acts upstream of or within ossification. Predicted to be located in Golgi apparatus; collagen-containing extracellular matrix; and extracellular space. Predicted to be part of protein-containing complex. Predicted to be active in extracellular matrix and extracellular region. Is expressed in several structures, including gut; heart; limb segment; reproductive system; and skeletal musculature. Human ortholog(s) of this gene implicated in alopecia-mental retardation syndrome 1; coronary artery disease; and type 2 diabetes mellitus. Orthologous to human AHSG (alpha 2-HS glycoprotein). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver E18 (RPKM 13022.2), liver adult (RPKM 6468.6) and 1 other tissue See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ahsg in Genome Data Viewer
    Location:
    16 B1; 16 13.74 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (22710793..22718193)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (22892015..22899451)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30416 Neighboring gene TBCC domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E484 Neighboring gene DnaJ heat shock protein family (Hsp40) member B11 Neighboring gene predicted gene, 30505 Neighboring gene predicted gene, 30611 Neighboring gene fetuin beta

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables receptor signaling protein tyrosine kinase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in collagen-containing extracellular matrix ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    alpha-2-HS-glycoprotein
    Names
    countertrypin
    fetuin-A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001276449.2NP_001263378.1  alpha-2-HS-glycoprotein isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      CT027991
      Conserved Domains (1) summary
      smart00043
      Location:2696
      CY; Cystatin-like domain
    2. NM_001276450.2NP_001263379.1  alpha-2-HS-glycoprotein isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      CT027991
      UniProtKB/TrEMBL
      Q3TIU3, Q3UEK5
      Conserved Domains (2) summary
      smart00043
      Location:26126
      CY; Cystatin-like domain
      pfam00031
      Location:142230
      Cystatin; Cystatin domain
    3. NM_013465.3NP_038493.1  alpha-2-HS-glycoprotein isoform 1 precursor

      See identical proteins and their annotated locations for NP_038493.1

      Status: VALIDATED

      Source sequence(s)
      CT027991
      Consensus CDS
      CCDS28071.1
      UniProtKB/Swiss-Prot
      O35634, P29699
      UniProtKB/TrEMBL
      Q3TIU3, Q3UEK5, Q3UEK9
      Related
      ENSMUSP00000023583.6, ENSMUST00000023583.7
      Conserved Domains (2) summary
      smart00043
      Location:26133
      CY; Cystatin-like domain
      pfam00031
      Location:149239
      Cystatin; Cystatin domain

    RNA

    1. NR_075099.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT027991
      Related
      ENSMUST00000232098.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      22710793..22718193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)