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    RIMBP2 RIMS binding protein 2 [ Homo sapiens (human) ]

    Gene ID: 23504, updated on 3-Apr-2024

    Summary

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    Official Symbol
    RIMBP2provided by HGNC
    Official Full Name
    RIMS binding protein 2provided by HGNC
    Primary source
    HGNC:HGNC:30339
    See related
    Ensembl:ENSG00000060709 MIM:611602; AllianceGenome:HGNC:30339
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RBP2; RIM-BP2; PPP1R133
    Summary
    Predicted to be involved in neuromuscular synaptic transmission. Predicted to be located in plasma membrane and synapse. Predicted to be active in presynaptic active zone cytoplasmic component. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in brain (RPKM 6.7), adrenal (RPKM 4.2) and 9 other tissues See more
    Orthologs
    mouse all
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    Genomic context

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    Location:
    12q24.33
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (130396133..130716299, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (130433406..130754746, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (130880678..131200844, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984480 Neighboring gene uncharacterized LOC101927786 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25825 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25828 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25829 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25830 Neighboring gene piwi like RNA-mediated gene silencing 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:130876206-130876706 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:130876795-130877994 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25849 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130931901-130932400 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130935063-130935689 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:130938232-130938396 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130947695-130948194 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:130954155-130954656 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:130954657-130955156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130956221-130956721 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7343 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:130966855-130967455 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130988440-130988940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130988941-130989441 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130998885-130999583 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25887 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:131047373-131048572 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25901 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131092324-131092520 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131097951-131098545 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr12:131118450-131118967 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131145339-131145838 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131188343-131189087 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131212975-131213518 Neighboring gene uncharacterized LOC105370080 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131246445-131247250 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7345 Neighboring gene Sharpr-MPRA regulatory region 14372 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:131271649-131272370 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:131272371-131273092 Neighboring gene Sharpr-MPRA regulatory region 967 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7346 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:131290439-131291361 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131296228-131296411 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7347 Neighboring gene uncharacterized LOC124903117 Neighboring gene syntaxin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Structure and evolution of RIM-BP genes: identification of a novel family member. Mittelstaedt T, et al. Gene, 2007 Nov 15. PMID 17855024
    2. The RIM/NIM family of neuronal C2 domain proteins. Interactions with Rab3 and a new class of Src homology 3 domain proteins. Wang Y, et al. J Biol Chem, 2000 Jun 30. PMID 10748113
    3. Depletion of LncRNA NEAT1 Rescues Mitochondrial Dysfunction Through NEDD4L-Dependent PINK1 Degradation in Animal Models of Alzheimer's Disease. Huang Z, et al. Front Cell Neurosci, 2020. PMID 32140098, Free PMC Article
    4. Genome-wide association study of Alzheimer's disease with psychotic symptoms. Hollingworth P, et al. Mol Psychiatry, 2012 Dec. PMID 22005930, Free PMC Article
    5. Humoral detection of leukaemia-associated antigens in presentation acute myeloid leukaemia. Guinn BA, et al. Biochem Biophys Res Commun, 2005 Oct 7. PMID 16112646

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. TCF4 Mutations Disrupt Synaptic Function Through Dysregulation of RIMBP2 in Patient-Derived Cortical Neurons.
      Title: TCF4 Mutations Disrupt Synaptic Function Through Dysregulation of RIMBP2 in Patient-Derived Cortical Neurons.
    2. Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
      Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
    3. RIMBP2 is identified in humans
      Title: Structure and evolution of RIM-BP genes: identification of a novel family member.
    Submit: New GeneRIF Correction

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    EBI GWAS Catalog

    Description
    Genome-wide association study of Alzheimer's disease with psychotic symptoms.
    EBI GWAS Catalog

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Clone Names

    • KIAA0318, MGC15831

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in neuromuscular synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RIMS-binding protein 2
    Names
    RIM binding protein 2
    protein phosphatase 1, regulatory subunit 133

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001351226.2 → NP_001338155.1  RIMS-binding protein 2 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1), as well as variants 2 and 3, encodes the longest isoform (a).
      Source sequence(s)
      AC063926, AC073912, AC095350
      Consensus CDS
      CCDS91774.1
      UniProtKB/TrEMBL
      A0A8I5QJU8
      Related
      ENSP00000510530.1, ENST00000690669.1
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    2. NM_001351227.2 → NP_001338156.1  RIMS-binding protein 2 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2), as well as variants 1 and 3, encodes the longest isoform (a).
      Source sequence(s)
      AC063926, AC073912, AC095350
      Consensus CDS
      CCDS91774.1
      UniProtKB/TrEMBL
      A0A8I5QJU8
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    3. NM_001351228.2 → NP_001338157.1  RIMS-binding protein 2 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3), as well as variants 1 and 2, encodes the longest isoform (a).
      Source sequence(s)
      AC063926, AC095350
      Consensus CDS
      CCDS91774.1
      UniProtKB/TrEMBL
      A0A8I5QJU8
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    4. NM_001351229.2 → NP_001338158.1  RIMS-binding protein 2 isoform b

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (6) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam15030
      Location:1 → 92
      DUF4527; Protein of unknown function (DUF4527)

    5. NM_001351230.2 → NP_001338159.1  RIMS-binding protein 2 isoform c

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      UniProtKB/TrEMBL
      A0A9L9PY66
      Related
      ENSP00000516746.1, ENST00000707118.1
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    6. NM_001351231.2 → NP_001338160.1  RIMS-binding protein 2 isoform d

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    7. NM_001351232.2 → NP_001338161.1  RIMS-binding protein 2 isoform f

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      Consensus CDS
      CCDS91777.1
      UniProtKB/TrEMBL
      A0A2R8YFN7, A0A8I5KQF3
      Related
      ENSP00000509541.1, ENST00000688340.1
      Conserved Domains (4) summary
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam15030
      Location:1 → 92
      DUF4527; Protein of unknown function (DUF4527)

    8. NM_001351233.2 → NP_001338162.1  RIMS-binding protein 2 isoform g

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (4) summary
      cd12014
      Location:79 → 139
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:208 → 285
      FN3; Fibronectin type 3 domain
      cd00063
      Location:395 → 481
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:301 → 364
      fn3; Fibronectin type III domain

    9. NM_001393614.1 → NP_001380543.1  RIMS-binding protein 2 isoform h

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (5) summary
      cd12012
      Location:1108 → 1169
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1212 → 1272
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    10. NM_001393615.1 → NP_001380544.1  RIMS-binding protein 2 isoform i

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      Consensus CDS
      CCDS91775.1
      UniProtKB/TrEMBL
      A0A8I5KWW4
      Conserved Domains (5) summary
      cd12012
      Location:1108 → 1169
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1212 → 1272
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    11. NM_001393616.1 → NP_001380545.1  RIMS-binding protein 2 isoform i

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Consensus CDS
      CCDS91775.1
      UniProtKB/TrEMBL
      A0A8I5KWW4
      Conserved Domains (5) summary
      cd12012
      Location:1108 → 1169
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1212 → 1272
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    12. NM_001393617.1 → NP_001380546.1  RIMS-binding protein 2 isoform i

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Consensus CDS
      CCDS91775.1
      UniProtKB/TrEMBL
      A0A8I5KWW4
      Related
      ENSP00000510770.1, ENST00000689851.1
      Conserved Domains (5) summary
      cd12012
      Location:1108 → 1169
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1212 → 1272
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    13. NM_001393618.1 → NP_001380547.1  RIMS-binding protein 2 isoform a

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      Consensus CDS
      CCDS91774.1
      UniProtKB/TrEMBL
      A0A8I5QJU8
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    14. NM_001393619.1 → NP_001380548.1  RIMS-binding protein 2 isoform a

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Consensus CDS
      CCDS91774.1
      UniProtKB/TrEMBL
      A0A8I5QJU8
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    15. NM_001393620.1 → NP_001380549.1  RIMS-binding protein 2 isoform c

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      UniProtKB/TrEMBL
      A0A9L9PY66
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    16. NM_001393621.1 → NP_001380550.1  RIMS-binding protein 2 isoform c

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      UniProtKB/TrEMBL
      A0A9L9PY66
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    17. NM_001393622.1 → NP_001380551.1  RIMS-binding protein 2 isoform c

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      UniProtKB/TrEMBL
      A0A9L9PY66
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    18. NM_001393623.1 → NP_001380552.1  RIMS-binding protein 2 isoform c

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      UniProtKB/TrEMBL
      A0A9L9PY66
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    19. NM_001393624.1 → NP_001380553.1  RIMS-binding protein 2 isoform d

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (7) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    20. NM_001393625.1 → NP_001380554.1  RIMS-binding protein 2 isoform j

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (6) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam12329
      Location:17 → 86
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

    21. NM_001393626.1 → NP_001380555.1  RIMS-binding protein 2 isoform j

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (6) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam12329
      Location:17 → 86
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

    22. NM_001393627.1 → NP_001380556.1  RIMS-binding protein 2 isoform j

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      Conserved Domains (6) summary
      cd12012
      Location:869 → 930
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:973 → 1033
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam12329
      Location:17 → 86
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

    23. NM_001393628.1 → NP_001380557.1  RIMS-binding protein 2 isoform k

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Conserved Domains (6) summary
      cd12012
      Location:816 → 877
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:920 → 980
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam12329
      Location:17 → 86
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

    24. NM_001393629.1 → NP_001380558.1  RIMS-binding protein 2 isoform l

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC073912, AC095350
      Consensus CDS
      CCDS91776.1
      UniProtKB/TrEMBL
      A0A2R8Y6Z0
      Related
      ENSP00000509157.1, ENST00000690449.1
      Conserved Domains (7) summary
      cd12012
      Location:1108 → 1169
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1212 → 1272
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    25. NM_015347.5 → NP_056162.4  RIMS-binding protein 2 isoform e

      See identical proteins and their annotated locations for NP_056162.4

      Status: VALIDATED

      Source sequence(s)
      AC063926, AC095350
      Consensus CDS
      CCDS31925.1
      UniProtKB/Swiss-Prot
      O15034, Q96ID2
      Related
      ENSP00000261655.4, ENST00000261655.8
      Conserved Domains (5) summary
      cd12012
      Location:852 → 913
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:956 → 1016
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:171 → 231
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:487 → 573
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:393 → 456
      fn3; Fibronectin type III domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      130396133..130716299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047428628.1 → XP_047284584.1  RIMS-binding protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A2R8Y6Z0
      Related
      ENSP00000495590.1, ENST00000643940.1

    2. XM_047428630.1 → XP_047284586.1  RIMS-binding protein 2 isoform X7

    3. XM_047428629.1 → XP_047284585.1  RIMS-binding protein 2 isoform X6

    4. XM_011538106.4 → XP_011536408.1  RIMS-binding protein 2 isoform X4

      Conserved Domains (6) summary
      cd12012
      Location:937 → 998
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1041 → 1101
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:309 → 369
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:625 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:531 → 594
      fn3; Fibronectin type III domain
      cl02488
      Location:50 → 206
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    5. XM_017019106.2 → XP_016874595.1  RIMS-binding protein 2 isoform X5

    6. XM_011538105.4 → XP_011536407.1  RIMS-binding protein 2 isoform X3

      Conserved Domains (6) summary
      cd12012
      Location:990 → 1051
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1094 → 1154
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:309 → 369
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:438 → 515
      FN3; Fibronectin type 3 domain
      COG1196
      Location:49 → 201
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00063
      Location:625 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    7. XM_011538103.3 → XP_011536405.1  RIMS-binding protein 2 isoform X1

      Conserved Domains (6) summary
      cd12012
      Location:1229 → 1290
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1333 → 1393
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:309 → 369
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:625 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:531 → 594
      fn3; Fibronectin type III domain
      cl02488
      Location:50 → 206
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    8. XM_017019105.3 → XP_016874594.1  RIMS-binding protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A2R8Y6Z0
      Conserved Domains (7) summary
      cd12012
      Location:1108 → 1169
      SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12013
      Location:1212 → 1272
      SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd12014
      Location:188 → 248
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      smart00060
      Location:317 → 394
      FN3; Fibronectin type 3 domain
      cd00063
      Location:504 → 590
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:410 → 473
      fn3; Fibronectin type III domain
      pfam13863
      Location:24 → 85
      DUF4200; Domain of unknown function (DUF4200)

    9. XM_011538107.4 → XP_011536409.1  RIMS-binding protein 2 isoform X8

      UniProtKB/TrEMBL
      A0A2R8YFN7
      Conserved Domains (4) summary
      cd12014
      Location:309 → 369
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:625 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:531 → 594
      fn3; Fibronectin type III domain
      cl02488
      Location:58 → 206
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    10. XM_011538108.4 → XP_011536410.1  RIMS-binding protein 2 isoform X9

      UniProtKB/TrEMBL
      A0A2R8YFN7
      Conserved Domains (4) summary
      cd12014
      Location:309 → 369
      SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
      cd00063
      Location:625 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:531 → 594
      fn3; Fibronectin type III domain
      cl02488
      Location:58 → 206
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      130433406..130754746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054371607.1 → XP_054227582.1  RIMS-binding protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A2R8Y6Z0

    2. XM_054371613.1 → XP_054227588.1  RIMS-binding protein 2 isoform X7

    3. XM_054371612.1 → XP_054227587.1  RIMS-binding protein 2 isoform X6

    4. XM_054371610.1 → XP_054227585.1  RIMS-binding protein 2 isoform X4

    5. XM_054371611.1 → XP_054227586.1  RIMS-binding protein 2 isoform X5

    6. XM_054371609.1 → XP_054227584.1  RIMS-binding protein 2 isoform X3

    7. XM_054371606.1 → XP_054227581.1  RIMS-binding protein 2 isoform X1

    8. XM_054371608.1 → XP_054227583.1  RIMS-binding protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A2R8Y6Z0

    9. XM_054371614.1 → XP_054227589.1  RIMS-binding protein 2 isoform X8

    10. XM_054371615.1 → XP_054227590.1  RIMS-binding protein 2 isoform X9

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O15034.3 GenPept UniProtKB/Swiss-Prot:O15034

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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