U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PARM1-AS1 PARM1 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100507388, updated on 10-Oct-2023

    Summary

    Official Symbol
    PARM1-AS1provided by HGNC
    Official Full Name
    PARM1 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:41051
    See related
    Ensembl:ENSG00000249717 AllianceGenome:HGNC:41051
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    4q13.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (74955974..74970362, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (78296109..78310497, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (75881184..75895572, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377280 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:75811383-75812582 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 23 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15479 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15480 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21615 Neighboring gene prostate androgen-regulated mucin-like protein 1 Neighboring gene NANOG hESC enhancer GRCh37_chr4:75916580-75917081 Neighboring gene NANOG hESC enhancer GRCh37_chr4:75951718-75952258 Neighboring gene uncharacterized LOC107986289 Neighboring gene long intergenic non-protein coding RNA 2562

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_121617.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK027257
      Related
      ENST00000508031.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      74955974..74970362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      78296109..78310497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)