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    Camkk1 calcium/calmodulin-dependent protein kinase kinase 1, alpha [ Mus musculus (house mouse) ]

    Gene ID: 55984, updated on 28-Apr-2024

    Summary

    Official Symbol
    Camkk1provided by MGI
    Official Full Name
    calcium/calmodulin-dependent protein kinase kinase 1, alphaprovided by MGI
    Primary source
    MGI:MGI:1891766
    See related
    Ensembl:ENSMUSG00000020785 AllianceGenome:MGI:1891766
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Camkk; caMKK 1; caM-KK 1; CaMKKalpha; caMKK alpha; caM-KK alpha
    Summary
    Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in activation of protein kinase activity and intracellular signal transduction. Predicted to act upstream of or within phosphorylation. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in cytoplasm. Is expressed in central nervous system and retina. Orthologous to human CAMKK1 (calcium/calmodulin dependent protein kinase kinase 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in bladder adult (RPKM 25.3), cortex adult (RPKM 17.1) and 15 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    11 B4; 11 45.12 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (72906869..72932899)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (73016043..73042073)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7013 Neighboring gene ATPase, Ca++ transporting, ubiquitous Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:72820103-72820212 Neighboring gene RIKEN cDNA 4732414G09 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:72828695-72828896 Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 1 Neighboring gene STARR-positive B cell enhancer ABC_E10684 Neighboring gene STARR-positive B cell enhancer ABC_E5246 Neighboring gene nuclear cap binding subunit 3 Neighboring gene STARR-positive B cell enhancer mm9_chr11:72885264-72885564 Neighboring gene STARR-seq mESC enhancer starr_29927 Neighboring gene integrin alpha E, epithelial-associated Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:72921846-72921999 Neighboring gene histone H3 associated protein kinase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calmodulin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calmodulin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calmodulin-dependent protein kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calmodulin-dependent protein kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables calmodulin-dependent protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    calcium/calmodulin-dependent protein kinase kinase 1
    Names
    caM-kinase IV kinase
    caM-kinase kinase 1
    caM-kinase kinase alpha
    calcium calmodulin dependent protein kinase kinase alpha
    NP_001349770.1
    NP_061371.2
    XP_006533824.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001362841.1NP_001349770.1  calcium/calmodulin-dependent protein kinase kinase 1

      Status: VALIDATED

      Source sequence(s)
      AI843712, AL670399
      Consensus CDS
      CCDS24993.1
      UniProtKB/Swiss-Prot
      Q8VBY2, Q9R054
      Conserved Domains (1) summary
      cd14200
      Location:127410
      STKc_CaMKK1; Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1
    2. NM_018883.3NP_061371.2  calcium/calmodulin-dependent protein kinase kinase 1

      See identical proteins and their annotated locations for NP_061371.2

      Status: VALIDATED

      Source sequence(s)
      AI846603, AK144483, AL670399
      Consensus CDS
      CCDS24993.1
      UniProtKB/Swiss-Prot
      Q8VBY2, Q9R054
      Related
      ENSMUSP00000090613.7, ENSMUST00000092937.13
      Conserved Domains (1) summary
      cd14200
      Location:127410
      STKc_CaMKK1; Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1

    RNA

    1. NR_156179.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI843712, AK144483, AL670399
      Related
      ENSMUST00000155720.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      72906869..72932899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006533761.4XP_006533824.1  calcium/calmodulin-dependent protein kinase kinase 1 isoform X1

      See identical proteins and their annotated locations for XP_006533824.1

      UniProtKB/Swiss-Prot
      Q8VBY2, Q9R054
      Conserved Domains (1) summary
      cd14200
      Location:127410
      STKc_CaMKK1; Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1