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    Smr3a submaxillary gland androgen regulated protein 3A [ Mus musculus (house mouse) ]

    Gene ID: 20599, updated on 23-Jun-2021

    Summary

    Official Symbol
    Smr3aprovided by MGI
    Official Full Name
    submaxillary gland androgen regulated protein 3Aprovided by MGI
    Primary source
    MGI:MGI:102763
    See related
    Ensembl:ENSMUSG00000029280
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sm; MSG; MSG1; MSG3; Smr1; Smr3; AA589601
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Smr3a in Genome Data Viewer
    Location:
    5; 5 E1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88139414..88156393)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (87991555..88008534)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88431550..88437559)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700066N21 gene Neighboring gene cDNA sequence BC051076 Neighboring gene calcium binding protein, spermatid specific 1 Neighboring gene heat shock protein 5 pseudogene Neighboring gene submaxillary gland androgen regulated protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of sensory perception of pain IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    submaxillary gland androgen-regulated protein 3A
    Names
    salivary protein MSG1
    submaxillary gland androgen regulated protein 3
    submaxillary gland androgen-regulated protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011422.3NP_035552.1  submaxillary gland androgen-regulated protein 3A precursor

      See identical proteins and their annotated locations for NP_035552.1

      Status: VALIDATED

      Source sequence(s)
      AA727574, AC154123, BF454619
      Consensus CDS
      CCDS19398.1
      UniProtKB/Swiss-Prot
      Q61900
      Related
      ENSMUSP00000031211.5, ENSMUST00000031211.6
      Conserved Domains (1) summary
      pfam15621
      Location:130
      PROL5-SMR; Proline-rich submaxillary gland androgen-regulated family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      88139414..88156393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320753.2XP_017176242.1  submaxillary gland androgen-regulated protein 3A isoform X1

      UniProtKB/Swiss-Prot
      Q61900
      Conserved Domains (1) summary
      pfam15621
      Location:130
      PROL5-SMR; Proline-rich submaxillary gland androgen-regulated family

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_011423.2: Suppressed sequence

      Description
      NM_011423.2: This RefSeq was permanently suppressed because currently there is not sufficient data to support this transcript.
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