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    Ildr2 immunoglobulin-like domain containing receptor 2 [ Mus musculus (house mouse) ]

    Gene ID: 100039795, updated on 22-Aug-2021

    Summary

    Official Symbol
    Ildr2provided by MGI
    Official Full Name
    immunoglobulin-like domain containing receptor 2provided by MGI
    Primary source
    MGI:MGI:1196370
    See related
    Ensembl:ENSMUSG00000040612
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ll; Dbsm; Dbsm1; AI852300; D1Ertd471; D1Ertd471e; 2810478N18Rik; 3110063L10Rik
    Expression
    Biased expression in frontal lobe adult (RPKM 9.1), cortex adult (RPKM 6.7) and 12 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ildr2 in Genome Data Viewer
    Location:
    1 H2.3; 1 73.61 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (166081630..166144405)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (166254060..166316832)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (168184270..168246963)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene glycoprotein A33 (transmembrane) Neighboring gene maelstrom spermatogenic transposon silencer Neighboring gene transcriptional adaptor 1 Neighboring gene pogo transposable element with KRAB domain Neighboring gene ubiquinol-cytochrome c reductase subunit pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    immunoglobulin-like domain-containing receptor 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164528.1NP_001158000.1  immunoglobulin-like domain-containing receptor 2 isoform 1 precursor

      See identical proteins and their annotated locations for NP_001158000.1

      Status: VALIDATED

      Source sequence(s)
      AC034122
      Consensus CDS
      CCDS48431.1
      UniProtKB/Swiss-Prot
      B5TVM2
      Related
      ENSMUSP00000107047.2, ENSMUST00000111416.7
      Conserved Domains (2) summary
      pfam05624
      Location:201227
      LSR; Lipolysis stimulated receptor (LSR)
      cl11960
      Location:49182
      Ig; Immunoglobulin domain
    2. NM_001357428.1NP_001344357.1  immunoglobulin-like domain-containing receptor 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC034122
      Consensus CDS
      CCDS87913.1
      Related
      ENSMUSP00000142152.2, ENSMUST00000194964.6
      Conserved Domains (1) summary
      pfam05624
      Location:201227
      LSR; Lipolysis stimulated receptor (LSR)
    3. NM_001357429.1NP_001344358.1  immunoglobulin-like domain-containing receptor 2 isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AC034122
      Consensus CDS
      CCDS87916.1
      Related
      ENSMUSP00000141502.2, ENSMUST00000192732.6
    4. NM_001357430.1NP_001344359.1  immunoglobulin-like domain-containing receptor 2 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC034122
      Consensus CDS
      CCDS87915.1
      Related
      ENSMUSP00000142311.2, ENSMUST00000192638.6
      Conserved Domains (1) summary
      pfam05624
      Location:182208
      LSR; Lipolysis stimulated receptor (LSR)
    5. NM_001357431.1NP_001344360.1  immunoglobulin-like domain-containing receptor 2 isoform 5 precursor

      Status: VALIDATED

      Source sequence(s)
      AC034122
      Consensus CDS
      CCDS87914.1
      Related
      ENSMUSP00000141323.2, ENSMUST00000193860.2
      Conserved Domains (1) summary
      cl11960
      Location:132181
      Ig; Immunoglobulin domain
    6. NM_001357432.1NP_001344361.1  immunoglobulin-like domain-containing receptor 2 isoform 6 precursor

      Status: VALIDATED

      Source sequence(s)
      AC034122
      Consensus CDS
      CCDS87912.1
      Related
      ENSMUSP00000142240.2, ENSMUST00000195557.6
      Conserved Domains (2) summary
      pfam05624
      Location:201227
      LSR; Lipolysis stimulated receptor (LSR)
      cl11960
      Location:49182
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      166081630..166144405
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036164352.1XP_036020245.1  immunoglobulin-like domain-containing receptor 2 isoform X2

      Conserved Domains (1) summary
      cl11960
      Location:51181
      Ig; Immunoglobulin domain
    2. XM_011238731.3XP_011237033.1  immunoglobulin-like domain-containing receptor 2 isoform X3

      Conserved Domains (1) summary
      cl11960
      Location:132181
      Ig; Immunoglobulin domain
    3. XM_006496594.5XP_006496657.1  immunoglobulin-like domain-containing receptor 2 isoform X1

      Conserved Domains (2) summary
      pfam05624
      Location:170196
      LSR; Lipolysis stimulated receptor (LSR)
      cl11960
      Location:101150
      Ig; Immunoglobulin domain
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