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    Enam enamelin [ Mus musculus (house mouse) ]

    Gene ID: 13801, updated on 5-Mar-2024

    Summary

    Official Symbol
    Enamprovided by MGI
    Official Full Name
    enamelinprovided by MGI
    Primary source
    MGI:MGI:1333772
    See related
    Ensembl:ENSMUSG00000029286 AllianceGenome:MGI:1333772
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    abte
    Summary
    A structural constituent of tooth enamel. Acts upstream of or within several processes, including ameloblast differentiation; amelogenesis; and positive regulation of enamel mineralization. Located in extracellular matrix. Is expressed in lower jaw molar; molar enamel organ; and upper jaw incisor. Used to study amelogenesis imperfecta type 1B. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 1B and amelogenesis imperfecta type 1C. Orthologous to human ENAM (enamelin). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Enam in Genome Data Viewer
    Location:
    5 E1; 5 43.66 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88635834..88653908)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (88487975..88506049)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene chromobox protein homolog 3 pseudogene Neighboring gene ameloblastin Neighboring gene STARR-positive B cell enhancer ABC_E6342 Neighboring gene STARR-positive B cell enhancer ABC_E9255 Neighboring gene immunoglobulin joining chain Neighboring gene STARR-positive B cell enhancer ABC_E6343 Neighboring gene STARR-seq mESC enhancer starr_13570 Neighboring gene STARR-positive B cell enhancer ABC_E2748 Neighboring gene UTP3 small subunit processome component

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of tooth enamel IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of tooth enamel IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular matrix IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_017468.3NP_059496.1  enamelin precursor

      See identical proteins and their annotated locations for NP_059496.1

      Status: VALIDATED

      Source sequence(s)
      AC121585, BB093794, BC115848, CJ046275
      Consensus CDS
      CCDS19400.1
      UniProtKB/Swiss-Prot
      O55196
      UniProtKB/TrEMBL
      A0A0G2JEP7, Q548P8
      Related
      ENSMUSP00000031222.9, ENSMUST00000031222.9
      Conserved Domains (1) summary
      pfam15362
      Location:2161249
      Enamelin; Enamelin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      88635834..88653908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030254122.1XP_030109982.1  enamelin isoform X1

      UniProtKB/TrEMBL
      A0A0G2JEP7
      Conserved Domains (1) summary
      pfam15362
      Location:2151111
      Enamelin