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    Prmt7 protein arginine N-methyltransferase 7 [ Mus musculus (house mouse) ]

    Gene ID: 214572, updated on 21-Apr-2024

    Summary

    Official Symbol
    Prmt7provided by MGI
    Official Full Name
    protein arginine N-methyltransferase 7provided by MGI
    Primary source
    MGI:MGI:2384879
    See related
    Ensembl:ENSMUSG00000060098 AllianceGenome:MGI:2384879
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933402B05Rik
    Summary
    Enables histone methyltransferase activity (H4-R3 specific) and protein-arginine omega-N symmetric methyltransferase activity. Involved in DNA methylation involved in gamete generation; histone arginine methylation; and regulation of gene expression by genetic imprinting. Predicted to be located in cytosol; fibrillar center; and nucleoplasm. Is expressed in several structures, including brain and retina nuclear layer. Orthologous to human PRMT7 (protein arginine methyltransferase 7). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in testis adult (RPKM 37.9), ovary adult (RPKM 19.4) and 28 other tissues See more
    Orthologs
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    Genomic context

    Location:
    8 D3; 8 53.11 cM
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (106937686..106978326)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (106211054..106251694)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 Neighboring gene solute carrier family 7, member 6 opposite strand Neighboring gene sphingomyelin phosphodiesterase 3, neutral Neighboring gene RIKEN cDNA 4930506A18 gene Neighboring gene STARR-positive B cell enhancer ABC_E111 Neighboring gene STARR-positive B cell enhancer ABC_E5038 Neighboring gene predicted gene, 39238

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Targeted (6)  1 citation
    • Endonuclease-mediated (4) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC7929

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables histone H4 methyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables histone H4R3 methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables histone binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables histone methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-arginine N-methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein-arginine omega-N monomethyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein-arginine omega-N symmetric methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein-arginine omega-N symmetric methyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ribonucleoprotein complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within chromatin organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromatin remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in genomic imprinting IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within methylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in peptidyl-arginine methylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein methylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in spliceosomal snRNP assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in fibrillar center ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein arginine N-methyltransferase 7
    Names
    [Myelin basic protein]-arginine N-methyltransferase PRMT7
    histone-arginine N-methyltransferase PRMT7
    NP_663379.1
    XP_006530891.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145404.1NP_663379.1  protein arginine N-methyltransferase 7

      See identical proteins and their annotated locations for NP_663379.1

      Status: PROVISIONAL

      Source sequence(s)
      BC006705
      Consensus CDS
      CCDS22633.1
      UniProtKB/Swiss-Prot
      Q3TRZ6, Q69Z62, Q6B955, Q6PG80, Q922X9
      Related
      ENSMUSP00000071521.6, ENSMUST00000071592.12
      Conserved Domains (1) summary
      cl17173
      Location:37186
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      106937686..106978326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530828.5XP_006530891.1  protein arginine N-methyltransferase 7 isoform X1