U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C630043F03Rik RIKEN cDNA C630043F03 gene [ Mus musculus (house mouse) ]

    Gene ID: 68285, updated on 8-Feb-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    C630043F03Rikprovided by MGI
    Official Full Name
    RIKEN cDNA C630043F03 geneprovided by MGI
    Primary source
    MGI:MGI:1915535
    See related
    Ensembl:ENSMUSG00000084910 AllianceGenome:MGI:1915535
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See C630043F03Rik in Genome Data Viewer
    Location:
    4 C2; 4 36.06 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (72119481..72122167)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (72201244..72203930)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 11231 Neighboring gene STARR-seq mESC enhancer starr_10525 Neighboring gene predicted gene 11232 Neighboring gene STARR-seq mESC enhancer starr_10526 Neighboring gene STARR-seq mESC enhancer starr_10527 Neighboring gene STARR-seq mESC enhancer starr_10528 Neighboring gene STARR-positive B cell enhancer ABC_E2695 Neighboring gene transducin-like enhancer of split 1 Neighboring gene STARR-seq mESC enhancer starr_10529 Neighboring gene STARR-seq mESC enhancer starr_10530 Neighboring gene STARR-seq mESC enhancer starr_10531 Neighboring gene STARR-seq mESC enhancer starr_10532 Neighboring gene STARR-seq mESC enhancer starr_10533 Neighboring gene STARR-seq mESC enhancer starr_10534 Neighboring gene aldolase 1 A, retrogene 1 Neighboring gene pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Deletion of the sclerotome-enriched lncRNA PEAT augments ribosomal protein expression. Stafford DA, et al. Proc Natl Acad Sci U S A, 2017 Jan 3. PMID 27986952, Free PMC Article
    2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027923.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK041409, AK043880
      Related
      ENSMUST00000246336.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      72119481..72122167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.