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    Nron non-protein coding RNA, repressor of NFAT [ Mus musculus (house mouse) ]

    Gene ID: 320482, updated on 26-Mar-2024

    Summary

    Official Symbol
    Nronprovided by MGI
    Official Full Name
    non-protein coding RNA, repressor of NFATprovided by MGI
    Primary source
    MGI:MGI:2444126
    See related
    Ensembl:ENSMUSG00000086484 AllianceGenome:MGI:2444126
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm24353; A630071L07Rik
    Summary
    Acts upstream of or within negative regulation of dephosphorylation; regulation of calcineurin-NFAT signaling cascade; and regulation of cytokine production. Part of ribonucleoprotein complex. Is expressed in several structures, including gonad; heart; immune system; liver; and lung. Orthologous to human NRON (non-coding repressor of NFAT). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in thymus adult (RPKM 2.6), whole brain E14.5 (RPKM 0.1) and 1 other tissue See more
    Orthologs
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    Genomic context

    Location:
    2 B; 2 22.53 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (33695828..33703603)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (33805816..33813591)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene multivesicular body subunit 12B Neighboring gene predicted gene, 52507 Neighboring gene predicted gene, 33856 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:33672731-33672932 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:33677308-33677491 Neighboring gene VISTA enhancer mm716 Neighboring gene STARR-positive B cell enhancer mm9_chr2:33763748-33764049 Neighboring gene predicted gene, 39792 Neighboring gene STARR-seq mESC enhancer starr_04250 Neighboring gene STARR-positive B cell enhancer mm9_chr2:33789434-33789735 Neighboring gene predicted gene, 39793 Neighboring gene predicted gene 13403

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1)  1 citation
    • Endonuclease-mediated (1) 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045729.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK037308, AK042215, BX528552
      Related
      ENSMUST00000156297.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      33695828..33703603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)