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    Cd300e CD300E molecule [ Mus musculus (house mouse) ]

    Gene ID: 217306, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cd300eprovided by MGI
    Official Full Name
    CD300E moleculeprovided by MGI
    Primary source
    MGI:MGI:2387602
    See related
    Ensembl:ENSMUSG00000048498
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Clm; CLM2; Trem; TREM5; Cd300l; Cd300le; BC034097
    Expression
    Biased expression in spleen adult (RPKM 2.1), lung adult (RPKM 1.0) and 10 other tissues See more
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    Genomic context

    See Cd300e in Genome Data Viewer
    Location:
    11; 11 E2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (114942743..114957502, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115051917..115066676, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (114913231..114923352, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CD300 molecule like family member D5 Neighboring gene CD300 molecule like family member D3 Neighboring gene RAB37, member RAS oncogene family Neighboring gene CD300 molecule like family member F Neighboring gene solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    General gene information

    Homology

    Clone Names

    • MGC31495, MGC49720

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    acts_upstream_of_or_within immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    CMRF35-like molecule 2
    Names
    CD300 antigen like family member E
    CD300e antigen
    CMRF-35-like molecule-1
    immune receptor expressed on myeloid cells 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172050.3NP_742047.1  CMRF35-like molecule 2 precursor

      See identical proteins and their annotated locations for NP_742047.1

      Status: VALIDATED

      Source sequence(s)
      AL607025
      Consensus CDS
      CCDS25618.1
      UniProtKB/Swiss-Prot
      Q8K249
      Related
      ENSMUSP00000054883.8, ENSMUST00000062787.8
      Conserved Domains (1) summary
      cd05716
      Location:24126
      Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      114942743..114957502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006533073.1XP_006533136.1  CMRF35-like molecule 2 isoform X1

      See identical proteins and their annotated locations for XP_006533136.1

      UniProtKB/Swiss-Prot
      Q8K249
      Conserved Domains (1) summary
      cd05716
      Location:24126
      Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains
    2. XM_006533074.1XP_006533137.1  CMRF35-like molecule 2 isoform X1

      See identical proteins and their annotated locations for XP_006533137.1

      UniProtKB/Swiss-Prot
      Q8K249
      Conserved Domains (1) summary
      cd05716
      Location:24126
      Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains
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