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    Gm20736 predicted gene, 20736 [ Mus musculus (house mouse) ]

    Gene ID: 380994, updated on 8-Feb-2024

    Summary

    Official Symbol
    Gm20736provided by MGI
    Official Full Name
    predicted gene, 20736provided by MGI
    Primary source
    MGI:MGI:5434092
    See related
    Ensembl:ENSMUSG00000093993 AllianceGenome:MGI:5434092
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to be involved in meiotic cell cycle and spermatid development. Predicted to be active in synaptonemal complex. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    Y; Y C3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) Y NC_000087.8 (65386218..65412441)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) Y NC_000087.7 (65377690..65403913)

    Chromosome Y - NC_000087.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 21171 Neighboring gene predicted gene, 20924 Neighboring gene predicted gene, 20936 Neighboring gene predicted gene, 20934

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC118201, MGC118285

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in meiotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in spermatid development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in synaptonemal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Sycp3 like Y-linked related protein
    Names
    Sycp3 like Y-linked related

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037748.1NP_001032837.2  Sycp3 like Y-linked related protein

      Status: VALIDATED

      Source sequence(s)
      BC100464
      Consensus CDS
      CCDS57888.1
      UniProtKB/TrEMBL
      A0A9L6KE01, A0A9L6KE25, A0A9L6KEG3, A0A9L6KEH4, J3QNV4
      Related
      ENSMUSP00000139870.2, ENSMUST00000190282.7
      Conserved Domains (1) summary
      pfam04803
      Location:78181
      Cor1; Cor1/Xlr/Xmr conserved region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000087.8 Reference GRCm39 C57BL/6J

      Range
      65386218..65412441
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)