U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Slc30a8 solute carrier family 30 (zinc transporter), member 8 [ Mus musculus (house mouse) ]

    Gene ID: 239436, updated on 21-Apr-2024

    Summary

    Official Symbol
    Slc30a8provided by MGI
    Official Full Name
    solute carrier family 30 (zinc transporter), member 8provided by MGI
    Primary source
    MGI:MGI:2442682
    See related
    Ensembl:ENSMUSG00000022315 AllianceGenome:MGI:2442682
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ZnT8; ZnT-8; C820002P14Rik
    Summary
    Enables protein homodimerization activity. Involved in cellular zinc ion homeostasis; insulin secretion; and response to glucose. Located in cytoplasmic vesicle. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human SLC30A8 (solute carrier family 30 member 8). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    15 C; 15 19.88 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (52158949..52199194)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (52295553..52335798)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein 10; DNA segment, Chr X, human DXS648E; 24.6 kDa protein Neighboring gene predicted gene 7543 Neighboring gene STARR-seq mESC enhancer starr_38666 Neighboring gene predicted gene, 41321 Neighboring gene predicted gene, 41322

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (7)  1 citation
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables zinc ion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables zinc ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables zinc ion transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables zinc ion transmembrane transporter activity TAS
    Traceable Author Statement
    more info
     
    enables zinc:proton antiporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    NOT involved_in glucose homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in insulin processing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in insulin secretion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in insulin secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in insulin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in intracellular zinc ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in intracellular zinc ion homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of insulin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of vesicle-mediated transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to glucose IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to glucose IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to glucose ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to zinc ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in zinc ion import across plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in zinc ion import into organelle ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in zinc ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within zinc ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in zinc ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi membrane TAS
    Traceable Author Statement
    more info
     
    located_in cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in secretory granule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in secretory granule ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in secretory granule membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in secretory granule membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    proton-coupled zinc antiporter SLC30A8
    Names
    zinc transporter 8

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172816.4NP_766404.1  proton-coupled zinc antiporter SLC30A8

      See identical proteins and their annotated locations for NP_766404.1

      Status: VALIDATED

      Source sequence(s)
      AC127562
      Consensus CDS
      CCDS27464.1
      UniProtKB/Swiss-Prot
      Q8BGG0
      Related
      ENSMUSP00000035257.3, ENSMUST00000037240.3
      Conserved Domains (2) summary
      TIGR01297
      Location:82352
      CDF; cation diffusion facilitator family transporter
      pfam01545
      Location:82273
      Cation_efflux; Cation efflux family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      52158949..52199194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)