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    Aldh4a1 aldehyde dehydrogenase 4 family, member A1 [ Mus musculus (house mouse) ]

    Gene ID: 212647, updated on 23-Jun-2021

    Summary

    Official Symbol
    Aldh4a1provided by MGI
    Official Full Name
    aldehyde dehydrogenase 4 family, member A1provided by MGI
    Primary source
    MGI:MGI:2443883
    See related
    Ensembl:ENSMUSG00000028737
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ALD; Ahd; Ssd; Ahd-; Ahd1; P5cd; Ahd-1; Aldh4; P5cdh; Ssdh1; P5cdhl; P5cdhs; Aldh5a1; E330022C09; A930035F14Rik
    Expression
    Broad expression in liver adult (RPKM 211.3), kidney adult (RPKM 197.0) and 17 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Aldh4a1 in Genome Data Viewer
    Location:
    4 D3; 4 70.79 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (139348404..139377002)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (139622871..139649691)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (139178809..139205606)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene ubiquitin protein ligase E3 component n-recognin 4 Neighboring gene nuclear encoded tRNA valine 1 (anticodon AAC) Neighboring gene intermediate filament family orphan 2 Neighboring gene VISTA enhancer mm1506 Neighboring gene microRNA 7020 Neighboring gene taste receptor, type 1, member 2 Neighboring gene predicted gene, 42334

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
    Names
    L-glutamate gamma-semialdehyde dehydrogenase
    P5C dehydrogenase
    aldehyde dehydrogenase family 4 member A1
    NP_780647.3
    XP_006538756.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175438.4NP_780647.3  delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial precursor

      See identical proteins and their annotated locations for NP_780647.3

      Status: VALIDATED

      Source sequence(s)
      AL831790, CA494657, CD354968, CF536864, CK332989
      Consensus CDS
      CCDS18848.1
      UniProtKB/Swiss-Prot
      Q8CHT0
      Related
      ENSMUSP00000043821.10, ENSMUST00000039818.10
      Conserved Domains (1) summary
      cd07123
      Location:31552
      ALDH_F4-17_P5CDH; Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      139348404..139377002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006538693.5XP_006538756.1  delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial isoform X1

      Conserved Domains (1) summary
      cd07123
      Location:31485
      ALDH_F4-17_P5CDH; Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17
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