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    Coa6 cytochrome c oxidase assembly factor 6 [ Mus musculus (house mouse) ]

    Gene ID: 67892, updated on 23-Jun-2021

    Summary

    Official Symbol
    Coa6provided by MGI
    Official Full Name
    cytochrome c oxidase assembly factor 6provided by MGI
    Primary source
    MGI:MGI:1915142
    See related
    Ensembl:ENSMUSG00000051671
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI447995; 1810063B05Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 35.5), adrenal adult (RPKM 29.9) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Coa6 in Genome Data Viewer
    Location:
    8; 8 E2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (127149240..127152174)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (126422501..126425435)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (128946401..128949335)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 35, member F3 Neighboring gene predicted gene, 53471 Neighboring gene predicted gene, 51604 Neighboring gene TAR RNA binding protein 1 Neighboring gene thymidine kinase 1 pseudogene Neighboring gene predicted gene, 51605

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables copper ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial intermembrane space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    part_of respiratory chain complex IV IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cytochrome c oxidase assembly factor 6 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174987.4NP_778152.1  cytochrome c oxidase assembly factor 6 homolog

      See identical proteins and their annotated locations for NP_778152.1

      Status: VALIDATED

      Source sequence(s)
      BU562971, CO039015
      Consensus CDS
      CCDS52709.1
      UniProtKB/Swiss-Prot
      Q8BGD8
      Related
      ENSMUSP00000058279.5, ENSMUST00000059093.7
      Conserved Domains (1) summary
      cd00926
      Location:464
      Cyt_c_Oxidase_VIb; Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      127149240..127152174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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