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    6330403K07Rik RIKEN cDNA 6330403K07 gene [ Mus musculus (house mouse) ]

    Gene ID: 103712, updated on 5-Mar-2024

    Summary

    Official Symbol
    6330403K07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 6330403K07 geneprovided by MGI
    Primary source
    MGI:MGI:1918001
    See related
    Ensembl:ENSMUSG00000018451 AllianceGenome:MGI:1918001
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    UGS148
    Summary
    Is expressed in several structures, including lung; nervous system; and retina layer. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in CNS E18 (RPKM 156.1), whole brain E14.5 (RPKM 139.2) and 6 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See 6330403K07Rik in Genome Data Viewer
    Location:
    11 B4; 11 43.21 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (70922767..70924443, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (71031941..71033617, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene DEAH-box helicase 33 Neighboring gene predicted gene, 22297 Neighboring gene STARR-positive B cell enhancer ABC_E2359 Neighboring gene Der1-like domain family, member 2 Neighboring gene STARR-positive B cell enhancer ABC_E256 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:70833281-70833468 Neighboring gene MIS12 kinetochore complex component Neighboring gene STARR-seq mESC enhancer starr_29883 Neighboring gene RNA binding motif protein 7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_29884 Neighboring gene U6 snRNA-associated Sm-like protein LSm5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC103712

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134022.2NP_598783.1  uncharacterized protein LOC103712

      See identical proteins and their annotated locations for NP_598783.1

      Status: VALIDATED

      Source sequence(s)
      AK083923, BC069976, BY274488, BY336577
      UniProtKB/TrEMBL
      Q8VBZ2, Q9D3C2
      Related
      ENSMUSP00000158145.2, ENSMUST00000156068.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      70922767..70924443 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)