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    Gm5801 predicted pseudogene 5801 [ Mus musculus (house mouse) ]

    Gene ID: 545056, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm5801provided by MGI
    Official Full Name
    predicted pseudogene 5801provided by MGI
    Gene description
    ubiquitin-conjugating enzyme E2, J2 homolog pseudogene
    Primary source
    MGI:MGI:3646055
    See related
    AllianceGenome:MGI:3646055
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG545056
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    Genomic context

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    See Gm5801 in Genome Data Viewer
    Location:
    14 C3; 14 28.19 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (56247749..56248937, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (56010292..56011480, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene chymase 1, mast cell Neighboring gene mast cell protease, pseudogene 1 Neighboring gene chymase 2, mast cell Neighboring gene STARR-seq mESC enhancer starr_36788 Neighboring gene STARR-seq mESC enhancer starr_36789 Neighboring gene STARR-seq mESC enhancer starr_36790 Neighboring gene mast cell protease 1 Neighboring gene mast cell protease 2 Neighboring gene mast cell protease 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • ubiquitin-conjugating enzyme E2, J2 homolog pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002889.2 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC163646

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      56247749..56248937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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