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    Luzp1 leucine zipper protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 269593, updated on 16-Oct-2021

    Summary

    Official Symbol
    Luzp1provided by MGI
    Official Full Name
    leucine zipper protein 1provided by MGI
    Primary source
    MGI:MGI:107629
    See related
    Ensembl:ENSMUSG00000001089
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Luzp; AI266952; mFLJ00226; 2700072H04Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 24.4), cerebellum adult (RPKM 11.9) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Luzp1 in Genome Data Viewer
    Location:
    4 D3; 4 68.8 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (136189892..136282036)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (136462609..136554725)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (136025676..136105233)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31295 Neighboring gene 5-hydroxytryptamine (serotonin) receptor 1D Neighboring gene lysine (K)-specific demethylase 1A Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene testis expressed 46 Neighboring gene lactamase, beta-like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC169408, MGC169410

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within artery development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neural fold bending IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within neural fold bending IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within ventricular septum development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    leucine zipper protein 1
    Names
    leucine zipper motif-containing protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024452.2NP_077772.2  leucine zipper protein 1

      See identical proteins and their annotated locations for NP_077772.2

      Status: VALIDATED

      Source sequence(s)
      AK139583, AL671173
      Consensus CDS
      CCDS38923.1
      UniProtKB/Swiss-Prot
      Q8R4U7
      Related
      ENSMUSP00000130758.2, ENSMUST00000170102.8
      Conserved Domains (1) summary
      COG1196
      Location:19354
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      136189892..136282036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030253587.2XP_030109447.1  leucine zipper protein 1 isoform X1

      Conserved Domains (1) summary
      COG1196
      Location:19354
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    2. XM_006538921.3XP_006538984.1  leucine zipper protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006538984.1

      UniProtKB/Swiss-Prot
      Q8R4U7
      Related
      ENSMUSP00000101475.3, ENSMUST00000105849.9
      Conserved Domains (1) summary
      COG1196
      Location:19354
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    3. XM_030253588.1XP_030109448.1  leucine zipper protein 1 isoform X2

      Conserved Domains (1) summary
      COG1196
      Location:19354
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RNA

    1. XR_390755.2 RNA Sequence

    2. XR_390753.2 RNA Sequence

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