Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tex46 testis expressed 46 [ Mus musculus (house mouse) ]

    Gene ID: 67663, updated on 23-Jun-2021

    Summary

    Official Symbol
    Tex46provided by MGI
    Official Full Name
    testis expressed 46provided by MGI
    Primary source
    MGI:MGI:1914913
    See related
    Ensembl:ENSMUSG00000036921
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930549C01Rik
    Expression
    Restricted expression toward testis adult (RPKM 11.3) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tex46 in Genome Data Viewer
    Location:
    4; 4 D3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (136334313..136340590)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (136607091..136613279)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (136166352..136169128)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine (serotonin) receptor 1D Neighboring gene leucine zipper protein 1 Neighboring gene lysine (K)-specific demethylase 1A Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene lactamase, beta-like 1 Neighboring gene Eph receptor B2 Neighboring gene VISTA enhancer mm1494

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    testis-expressed protein 46

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026300.2NP_080576.1  testis-expressed protein 46

      See identical proteins and their annotated locations for NP_080576.1

      Status: PROVISIONAL

      Source sequence(s)
      AK016074
      Consensus CDS
      CCDS18808.1
      UniProtKB/TrEMBL
      Q9CPU3
      Related
      ENSMUSP00000038976.3, ENSMUST00000046647.3
      Conserved Domains (1) summary
      pfam17671
      Location:11161
      DUF5531; Family of unknown function (DUF5531)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      136334313..136340590
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011250327.4XP_011248629.1  testis-expressed protein 46 isoform X1

      Conserved Domains (1) summary
      pfam17671
      Location:56149
      DUF5531; Family of unknown function (DUF5531)
    Support Center