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    Ldlrad2 low density lipoprotein receptor class A domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 435811, updated on 5-Mar-2024

    Summary

    Official Symbol
    Ldlrad2provided by MGI
    Official Full Name
    low density lipoprotein receptor class A domain containing 2provided by MGI
    Primary source
    MGI:MGI:3588210
    See related
    Ensembl:ENSMUSG00000094035 AllianceGenome:MGI:3588210
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to human LDLRAD2 (low density lipoprotein receptor class A domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    4 D3; 4 69.99 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (137298185..137309429, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (137570875..137582118, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700013G24 gene Neighboring gene predicted gene 13010 Neighboring gene STARR-positive B cell enhancer mm9_chr4:137024403-137024704 Neighboring gene STARR-seq mESC enhancer starr_11780 Neighboring gene perlecan (heparan sulfate proteoglycan 2) Neighboring gene STARR-positive B cell enhancer ABC_E4690 Neighboring gene microRNA 7018 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:137149587-137149696 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:137150478-137150661 Neighboring gene STARR-seq mESC enhancer starr_11788 Neighboring gene ubiquitin specific peptidase 48 Neighboring gene predicted gene, 54263 Neighboring gene Rap1 GTPase-activating protein Neighboring gene RAP1 GTPase activating protein, opposite strand

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    low-density lipoprotein receptor class A domain-containing protein 2
    Names
    low density lipoprotein receptor A domain containing 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033979.2NP_001029151.1  low-density lipoprotein receptor class A domain-containing protein 2 isoform 1

      See identical proteins and their annotated locations for NP_001029151.1

      Status: VALIDATED

      Source sequence(s)
      BX000694
      Consensus CDS
      CCDS18819.1
      UniProtKB/TrEMBL
      Q3V0V0
      Related
      ENSMUSP00000136854.2, ENSMUST00000178923.2
    2. NM_001405419.1NP_001392348.1  low-density lipoprotein receptor class A domain-containing protein 2 isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      BX000694
      UniProtKB/TrEMBL
      A0A5F8MPH1
      Related
      ENSMUSP00000158970.2, ENSMUST00000238941.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      137298185..137309429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)