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    Noxa1 NADPH oxidase activator 1 [ Mus musculus (house mouse) ]

    Gene ID: 241275, updated on 21-Apr-2024

    Summary

    Official Symbol
    Noxa1provided by MGI
    Official Full Name
    NADPH oxidase activator 1provided by MGI
    Primary source
    MGI:MGI:2449980
    See related
    Ensembl:ENSMUSG00000036805 AllianceGenome:MGI:2449980
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NY-CO-31; SDCCAG31
    Summary
    Enables superoxide-generating NADPH oxidase activator activity. Acts upstream of or within superoxide metabolic process. Predicted to be located in cytoplasm and plasma membrane. Predicted to be part of NADPH oxidase complex. Predicted to be active in cytosol. Is expressed in pancreas and pancreas tip epithelium. Orthologous to human NOXA1 (NADPH oxidase activator 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in colon adult (RPKM 42.3), large intestine adult (RPKM 23.6) and 3 other tissues See more
    Orthologs
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    Genomic context

    Location:
    2 A3; 2 16.97 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (24975679..24985217, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (25085667..25095205, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor Neighboring gene microRNA 7664 Neighboring gene STARR-seq mESC enhancer starr_03956 Neighboring gene predicted gene, 39770 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 8 Neighboring gene STARR-seq mESC enhancer starr_03957 Neighboring gene VISTA enhancer mm1454 Neighboring gene predicted gene 13387 Neighboring gene Notch-regulated ankyrin repeat protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables SH3 domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables small GTPase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables superoxide-generating NADPH oxidase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables superoxide-generating NADPH oxidase activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables superoxide-generating NADPH oxidase activator activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of hydrogen peroxide metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of respiratory burst ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in superoxide anion generation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within superoxide metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in superoxide metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of NADPH oxidase complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163626.1NP_001157098.1  NADPH oxidase activator 1 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region compared to variant 1. This results in a shorter protein (isoform 2) compared to isoform 1.
      Source sequence(s)
      AK087263, AL732585
      Consensus CDS
      CCDS50524.1
      UniProtKB/Swiss-Prot
      Q8CJ00
      Related
      ENSMUSP00000110014.2, ENSMUST00000114373.8
      Conserved Domains (5) summary
      sd00006
      Location:3866
      TPR; TPR repeat [structural motif]
      pfam07719
      Location:3868
      TPR_2; Tetratricopeptide repeat
      pfam13414
      Location:38100
      TPR_11; TPR repeat
      cl02720
      Location:278355
      PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
      cl17036
      Location:365417
      SH3; Src Homology 3 domain superfamily
    2. NM_172204.4NP_757341.3  NADPH oxidase activator 1 isoform 1

      See identical proteins and their annotated locations for NP_757341.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AK087263, AL732585
      Consensus CDS
      CCDS15749.1
      UniProtKB/Swiss-Prot
      A2AJA1, Q80SY2, Q8BU68, Q8CJ00
      Related
      ENSMUSP00000037423.8, ENSMUST00000044018.8
      Conserved Domains (5) summary
      sd00006
      Location:3866
      TPR; TPR repeat [structural motif]
      pfam07719
      Location:3868
      TPR_2; Tetratricopeptide repeat
      pfam13414
      Location:38100
      TPR_11; TPR repeat
      cl02720
      Location:286363
      PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
      cl17036
      Location:373425
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      24975679..24985217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)