U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gm35878 predicted gene, 35878 [ Mus musculus (house mouse) ]

    Gene ID: 102639606, updated on 8-Feb-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Gm35878provided by MGI
    Official Full Name
    predicted gene, 35878provided by MGI
    Primary source
    MGI:MGI:5595037
    See related
    AllianceGenome:MGI:5595037
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in kidney adult (RPKM 1.3), placenta adult (RPKM 0.6) and 1 other tissue See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Gm35878 in Genome Data Viewer
    Location:
    11 E2; 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (118996668..119000010)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (119105138..119109184)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:118945094-118945295 Neighboring gene STARR-positive B cell enhancer ABC_E5312 Neighboring gene STARR-positive B cell enhancer ABC_E5313 Neighboring gene chromobox 4 Neighboring gene predicted gene, 39482 Neighboring gene STARR-positive B cell enhancer ABC_E7107 Neighboring gene STARR-positive B cell enhancer ABC_E7108 Neighboring gene predicted gene 11754 Neighboring gene STARR-positive B cell enhancer ABC_E7109 Neighboring gene predicted gene 11755 Neighboring gene STARR-positive B cell enhancer ABC_E1853 Neighboring gene TBC1 domain family, member 16 Neighboring gene microRNA 6934

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      118996668..119000010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_389219.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases