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    Tektl1 tektin like 1 [ Mus musculus (house mouse) ]

    Gene ID: 70976, updated on 5-Mar-2024

    Summary

    Official Symbol
    Tektl1provided by MGI
    Official Full Name
    tektin like 1provided by MGI
    Primary source
    MGI:MGI:1918226
    See related
    Ensembl:ENSMUSG00000078442 AllianceGenome:MGI:1918226
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ccdc105; 4931413A09Rik
    Summary
    Orthologous to human CCDC105 (coiled-coil domain containing 105). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 44.7) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    10 C1; 10 39.72 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (78582758..78623636, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (78746924..78787802, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 47459 Neighboring gene STARR-seq mESC enhancer starr_27229 Neighboring gene STARR-seq mESC enhancer starr_27231 Neighboring gene STARR-seq mESC enhancer starr_27232 Neighboring gene caspase 14 Neighboring gene predicted gene, 30400 Neighboring gene predicted gene, 53211 Neighboring gene solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 Neighboring gene STARR-seq mESC enhancer starr_27235 Neighboring gene olfactory receptor family 7 subfamily C member 70 Neighboring gene olfactory receptor family 7 subfamily A member 39

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in axonemal B tubule inner sheath IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    tektin-like protein 1
    Names
    coiled-coil domain containing 105
    coiled-coil domain-containing protein 105

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027630.1NP_081906.1  tektin-like protein 1

      See identical proteins and their annotated locations for NP_081906.1

      Status: VALIDATED

      Source sequence(s)
      AC159747
      Consensus CDS
      CCDS48614.1
      UniProtKB/Swiss-Prot
      G3X9S0, Q9D4K7
      Related
      ENSMUSP00000101022.3, ENSMUST00000105383.4
      Conserved Domains (1) summary
      pfam03528
      Location:158237
      Rabaptin; Rabaptin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      78582758..78623636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030245277.1XP_030101137.1  tektin-like protein 1 isoform X1