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    Tmem94 transmembrane protein 94 [ Mus musculus (house mouse) ]

    Gene ID: 71947, updated on 30-Apr-2024

    Summary

    Official Symbol
    Tmem94provided by MGI
    Official Full Name
    transmembrane protein 94provided by MGI
    Primary source
    MGI:MGI:1919197
    See related
    Ensembl:ENSMUSG00000020747 AllianceGenome:MGI:1919197
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Kiaa0195; mKIAA0195; 2310067B10Rik
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; dorsal root ganglion; liver; and retina. Orthologous to human TMEM94 (transmembrane protein 94). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 67.7), colon adult (RPKM 64.6) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    11 E2; 11 80.91 cM
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (115656245..115689859)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115765419..115799033)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23699 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E4016 Neighboring gene predicted gene, 46302 Neighboring gene microRNA 5621 Neighboring gene CASK-interacting protein 2 Neighboring gene STARR-positive B cell enhancer ABC_E3039 Neighboring gene tRNA splicing endonuclease subunit 54 Neighboring gene STARR-seq mESC enhancer starr_31175 Neighboring gene LLGL2 scribble cell polarity complex component Neighboring gene STARR-seq mESC enhancer starr_31178

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 
    • Endonuclease-mediated (3)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028014.3NP_082290.2  transmembrane protein 94

      See identical proteins and their annotated locations for NP_082290.2

      Status: VALIDATED

      Source sequence(s)
      BC053088, BY028850, CA325552
      Consensus CDS
      CCDS25646.1
      UniProtKB/Swiss-Prot
      B1AT99, Q7TSH8, Q80U66, Q8BL05, Q8K0Q0, Q91VY1
      Related
      ENSMUSP00000091440.5, ENSMUST00000093912.11
      Conserved Domains (1) summary
      pfam00689
      Location:12241333
      Cation_ATPase_C; Cation transporting ATPase, C-terminus

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      115656245..115689859
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036156999.1XP_036012892.1  transmembrane protein 94 isoform X4

    2. XM_030246339.1XP_030102199.1  transmembrane protein 94 isoform X7

    3. XM_006534271.2XP_006534334.1  transmembrane protein 94 isoform X3

      See identical proteins and their annotated locations for XP_006534334.1

      UniProtKB/Swiss-Prot
      B1AT99, Q7TSH8, Q80U66, Q8BL05, Q8K0Q0, Q91VY1
      Conserved Domains (1) summary
      pfam00689
      Location:12241333
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
    4. XM_036157000.1XP_036012893.1  transmembrane protein 94 isoform X7

    5. XM_036157001.1XP_036012894.1  transmembrane protein 94 isoform X7

    6. XM_036156998.1XP_036012891.1  transmembrane protein 94 isoform X3

      UniProtKB/Swiss-Prot
      B1AT99, Q7TSH8, Q80U66, Q8BL05, Q8K0Q0, Q91VY1
    7. XM_030246336.2XP_030102196.1  transmembrane protein 94 isoform X3

      UniProtKB/Swiss-Prot
      B1AT99, Q7TSH8, Q80U66, Q8BL05, Q8K0Q0, Q91VY1
    8. XM_036156997.1XP_036012890.1  transmembrane protein 94 isoform X3

      UniProtKB/Swiss-Prot
      B1AT99, Q7TSH8, Q80U66, Q8BL05, Q8K0Q0, Q91VY1
      Related
      ENSMUSP00000099322.2, ENSMUST00000103033.8
    9. XM_036157002.1XP_036012895.1  transmembrane protein 94 isoform X7

    10. XM_030246337.1XP_030102197.1  transmembrane protein 94 isoform X3

      UniProtKB/Swiss-Prot
      B1AT99, Q7TSH8, Q80U66, Q8BL05, Q8K0Q0, Q91VY1
    11. XM_017314774.2XP_017170263.1  transmembrane protein 94 isoform X5

    12. XM_030246338.1XP_030102198.1  transmembrane protein 94 isoform X6

    13. XM_006534270.4XP_006534333.1  transmembrane protein 94 isoform X1

      UniProtKB/TrEMBL
      A0A668KL57
      Related
      ENSMUSP00000159201.2, ENSMUST00000239299.2
      Conserved Domains (1) summary
      pfam00689
      Location:12351344
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
    14. XM_017314773.2XP_017170262.1  transmembrane protein 94 isoform X2

    15. XM_036157003.1XP_036012896.1  transmembrane protein 94 isoform X8

      UniProtKB/TrEMBL
      Q3U2K2

    RNA

    1. XR_004937038.1 RNA Sequence

    2. XR_001780054.3 RNA Sequence