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    Gpihbp1 GPI-anchored HDL-binding protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 68453, updated on 5-Apr-2024

    Summary

    Official Symbol
    Gpihbp1provided by MGI
    Official Full Name
    GPI-anchored HDL-binding protein 1provided by MGI
    Primary source
    MGI:MGI:1915703
    See related
    Ensembl:ENSMUSG00000022579 AllianceGenome:MGI:1915703
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GPI-HBP1; 1110002J19Rik
    Summary
    Enables lipase binding activity; lipoprotein particle binding activity; and protein transporter activity. Involved in several processes, including lipid homeostasis; positive regulation of chylomicron remnant clearance; and protein transport. Acts upstream of or within lipid transport. Located in apical plasma membrane; basolateral plasma membrane; and external side of plasma membrane. Is anchored component of plasma membrane. Human ortholog(s) of this gene implicated in familial GPIHBP1 deficiency. Orthologous to human GPIHBP1 (glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in lung adult (RPKM 157.2), subcutaneous fat pad adult (RPKM 146.6) and 10 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    15 D3; 15 34.59 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (75468479..75470062)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (75596630..75598213)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34646 Neighboring gene lymphocyte antigen 6 family member H Neighboring gene STARR-positive B cell enhancer ABC_E1174 Neighboring gene zinc finger protein 41 Neighboring gene STARR-seq mESC enhancer starr_39016 Neighboring gene predicted gene, 46519

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables acetylcholine receptor inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables chylomicron binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables chylomicron binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables chylomicron binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables high-density lipoprotein particle binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables lipase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables lipase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables lipase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables lipoprotein lipase activator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipoprotein particle binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables lipoprotein particle binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cholesterol homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    NOT acts_upstream_of_or_within cholesterol transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in intracellular protein transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within lipid transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of chylomicron remnant clearance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of chylomicron remodeling IC
    Inferred by Curator
    more info
    PubMed 
    involved_in positive regulation of lipoprotein lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of lipoprotein lipase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of lipoprotein lipase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of lipoprotein lipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein import IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein localization to cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein stabilization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to heparin ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in transcytosis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in triglyceride catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in triglyceride homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in triglyceride homeostasis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in triglyceride homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in triglyceride homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in basolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of catalytic complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in external side of plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1
    Names
    high density lipoprotein-binding protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347039.2NP_001333968.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC119264
      Consensus CDS
      CCDS84173.1
      UniProtKB/TrEMBL
      A0A087WNV7
      Related
      ENSMUSP00000139511.2, ENSMUST00000189944.7
    2. NM_001361294.1NP_001348223.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AC119264, AK050431, BC061225
      Consensus CDS
      CCDS88781.1
      UniProtKB/TrEMBL
      A0A087WPI6
      Related
      ENSMUSP00000139792.2, ENSMUST00000189874.2
      Conserved Domains (1) summary
      cl10471
      Location:61106
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
    3. NM_026730.2NP_081006.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform 1 precursor

      See identical proteins and their annotated locations for NP_081006.1

      Status: VALIDATED

      Source sequence(s)
      AC119264, BC061225
      Consensus CDS
      CCDS27545.1
      UniProtKB/Swiss-Prot
      Q9D1N2
      Related
      ENSMUSP00000023243.5, ENSMUST00000023243.11
      Conserved Domains (1) summary
      cd00117
      Location:61138
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      75468479..75470062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)