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    Vmn2r30 vomeronasal 2, receptor 30 [ Mus musculus (house mouse) ]

    Gene ID: 22306, updated on 11-Apr-2024

    Summary

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    Official Symbol
    Vmn2r30provided by MGI
    Official Full Name
    vomeronasal 2, receptor 30provided by MGI
    Primary source
    MGI:MGI:1316729
    See related
    Ensembl:ENSMUSG00000070847 AllianceGenome:MGI:1316729
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V2r15
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Vmn2r30 in Genome Data Viewer
    Location:
    7 A1; 7 4.24 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (7314722..7340530, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (7312211..7337493, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 2, receptor 29 Neighboring gene zinc finger protein 772 pseudogene Neighboring gene chloride channel, voltage-sensitive 4 Neighboring gene microRNA 5620 Neighboring gene predicted gene 3912 Neighboring gene vomeronasal 2, receptor 31

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A multigene family encoding a diverse array of putative pheromone receptors in mammals. Matsunami H, et al. Cell, 1997 Aug 22. PMID 9288756
    2. Viral Infection-Induced Differential Expression of LncRNAs Associated with Collagen in Mouse Placentas and Amniotic Sacs. Pan J, et al. Am J Reprod Immunol, 2015 Sep. PMID 26073538
    3. V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet, 2007 May. PMID 17382427
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    vomeronasal 2, receptor, 15
    Names
    vomeronasal organ family 2, receptor, 15
    vomeronasal receptor Vmn2r30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001384913.1 → NP_001371842.1  vomeronasal 2, receptor, 15 isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC149056
      UniProtKB/TrEMBL
      G3UYU1
      Related
      ENSMUSP00000134223.2, ENSMUST00000174368.9
      Conserved Domains (2) summary
      pfam07562
      Location:512 → 553
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:43 → 503
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    2. NM_009490.4 → NP_033516.3  vomeronasal 2, receptor, 15 isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AC149056
      Consensus CDS
      CCDS51994.1
      UniProtKB/TrEMBL
      K7N5W1, O35202
      Related
      ENSMUSP00000072296.7, ENSMUST00000072475.9
      Conserved Domains (4) summary
      pfam00003
      Location:599 → 833
      7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
      pfam01094
      Location:75 → 453
      ANF_receptor; Receptor family ligand binding region
      pfam07562
      Location:513 → 564
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:43 → 503
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      7314722..7340530 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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