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    Siglecl2 Siglec family like 2 [ Mus musculus (house mouse) ]

    Gene ID: 74054, updated on 5-Mar-2024

    Summary

    Official Symbol
    Siglecl2provided by MGI
    Official Full Name
    Siglec family like 2provided by MGI
    Primary source
    MGI:MGI:1921304
    See related
    Ensembl:ENSMUSG00000013353 AllianceGenome:MGI:1921304
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930538L19Rik; 4931406B18Rik
    Summary
    Predicted to enable sialic acid binding activity. Predicted to be involved in cell adhesion. Predicted to be active in plasma membrane. Orthologous to human SIGLECL1 (SIGLEC family like 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 3.5) See more
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    Genomic context

    Location:
    7 B3; 7 28.25 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (43141468..43155393, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (43492044..43505969, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39000 Neighboring gene STARR-positive B cell enhancer ABC_E4923 Neighboring gene V-set and immunoglobulin domain containing 10 like Neighboring gene IgLON family member 5 Neighboring gene predicted gene 9278 Neighboring gene Siglec family like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables sialic acid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of type I interferon production ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC74054

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028737.3NP_083013.2  uncharacterized protein LOC74054 precursor

      See identical proteins and their annotated locations for NP_083013.2

      Status: PREDICTED

      Source sequence(s)
      AK030125
      Consensus CDS
      CCDS21172.1
      UniProtKB/TrEMBL
      A2RSL7, Q9D4M0
      Related
      ENSMUSP00000013497.2, ENSMUST00000013497.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      43141468..43155393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017312340.1XP_017167829.1  uncharacterized protein LOC74054 isoform X1