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    Ccdc68 coiled-coil domain containing 68 [ Mus musculus (house mouse) ]

    Gene ID: 381175, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ccdc68provided by MGI
    Official Full Name
    coiled-coil domain containing 68provided by MGI
    Primary source
    MGI:MGI:3612676
    See related
    Ensembl:ENSMUSG00000038903
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BC046343
    Expression
    Biased expression in placenta adult (RPKM 9.7), bladder adult (RPKM 2.2) and 8 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ccdc68 in Genome Data Viewer
    Location:
    18; 18 E2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (70057929..70102559)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (69924858..69969488)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (70085213..70129138)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31564 Neighboring gene predicted gene, 36175 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene RAB27B, member RAS oncogene family Neighboring gene predicted gene, 41770 Neighboring gene dynactin associated protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Homology

    Clone Names

    • MGC54896

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in microtubule anchoring at centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein localization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of centriolar subdistal appendage ISO
    Inferred from Sequence Orthology
    more info
     
    located_in centriole ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intracellular anatomical structure IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 68

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_201362.2NP_958750.1  coiled-coil domain-containing protein 68

      See identical proteins and their annotated locations for NP_958750.1

      Status: PROVISIONAL

      Source sequence(s)
      AK078964
      Consensus CDS
      CCDS29330.1
      UniProtKB/Swiss-Prot
      Q8BVC4
      Related
      ENSMUSP00000046197.5, ENSMUST00000043929.11
      Conserved Domains (1) summary
      COG1196
      Location:68294
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      70057929..70102559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006526070.3XP_006526133.1  coiled-coil domain-containing protein 68 isoform X1

      Conserved Domains (1) summary
      COG1196
      Location:144396
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    2. XM_006526071.3XP_006526134.1  coiled-coil domain-containing protein 68 isoform X2

      Conserved Domains (1) summary
      COG1196
      Location:144370
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    3. XM_006526076.3XP_006526139.1  coiled-coil domain-containing protein 68 isoform X4

      See identical proteins and their annotated locations for XP_006526139.1

      Conserved Domains (1) summary
      COG1196
      Location:68320
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    4. XM_017317935.1XP_017173424.1  coiled-coil domain-containing protein 68 isoform X3

      Conserved Domains (1) summary
      COG1196
      Location:73325
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    5. XM_006526075.3XP_006526138.1  coiled-coil domain-containing protein 68 isoform X4

      See identical proteins and their annotated locations for XP_006526138.1

      Conserved Domains (1) summary
      COG1196
      Location:68320
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    6. XM_006526074.3XP_006526137.1  coiled-coil domain-containing protein 68 isoform X4

      See identical proteins and their annotated locations for XP_006526137.1

      Conserved Domains (1) summary
      COG1196
      Location:68320
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    7. XM_011246971.3XP_011245273.1  coiled-coil domain-containing protein 68 isoform X4

      See identical proteins and their annotated locations for XP_011245273.1

      Conserved Domains (1) summary
      COG1196
      Location:68320
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
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