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    Thrsp thyroid hormone responsive [ Mus musculus (house mouse) ]

    Gene ID: 21835, updated on 5-Mar-2024

    Summary

    Official Symbol
    Thrspprovided by MGI
    Official Full Name
    thyroid hormone responsiveprovided by MGI
    Primary source
    MGI:MGI:109126
    See related
    Ensembl:ENSMUSG00000035686 AllianceGenome:MGI:109126
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    S14; SPOT14
    Summary
    Enables protein homodimerization activity. Involved in regulation of triglyceride biosynthetic process. Acts upstream of or within response to bacterium. Located in cytosol. Is expressed in several structures, including alimentary system; central nervous system; heart; respiratory system; and sensory organ. Used to study attention deficit hyperactivity disorder. Orthologous to human THRSP (thyroid hormone responsive). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 923.9), mammary gland adult (RPKM 720.3) and 6 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    7 E1; 7 53.49 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (97062140..97066757, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (97412933..97417550, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9293 Neighboring gene ALG8 alpha-1,3-glucosyltransferase Neighboring gene NADH:ubiquinone oxidoreductase subunit C2 Neighboring gene STARR-seq mESC enhancer starr_19594 Neighboring gene predicted gene, 32945 Neighboring gene STARR-seq mESC enhancer starr_19596 Neighboring gene potassium channel tetramerisation domain containing 14

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables molecular function inhibitor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    thyroid hormone-inducible hepatic protein
    Names
    spot 14 protein
    thyroid hormone responsive SPOT14 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009381.3NP_033407.1  thyroid hormone-inducible hepatic protein

      See identical proteins and their annotated locations for NP_033407.1

      Status: VALIDATED

      Source sequence(s)
      AC172193, AI117155, AK077300, BY238050
      Consensus CDS
      CCDS21458.1
      UniProtKB/Swiss-Prot
      Q62264
      UniProtKB/TrEMBL
      Q543J4
      Related
      ENSMUSP00000042988.8, ENSMUST00000043077.8
      Conserved Domains (1) summary
      pfam07084
      Location:2147
      Spot_14; Thyroid hormone-inducible hepatic protein Spot 14

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      97062140..97066757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)