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    Vmn1r71 vomeronasal 1 receptor 71 [ Mus musculus (house mouse) ]

    Gene ID: 252910, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Vmn1r71provided by MGI
    Official Full Name
    vomeronasal 1 receptor 71provided by MGI
    Primary source
    MGI:MGI:2182255
    See related
    Ensembl:ENSMUSG00000059206 AllianceGenome:MGI:2182255
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1re13
    Summary
    Orthologous to human VN1R4 (vomeronasal 1 receptor 4). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    7 A1; 7 6.62 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (10481429..10483465, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (10747502..10749538, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene NLR family, pyrin domain containing 4B Neighboring gene predicted gene 5130 Neighboring gene STARR-seq mESC enhancer starr_18015 Neighboring gene STARR-seq mESC enhancer starr_18016 Neighboring gene zinc finger and SCAN domain containing 4A Neighboring gene zinc finger protein 184 (Kruppel-like) pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A candidate subspecies discrimination system involving a vomeronasal receptor gene with different alleles fixed in M. m. domesticus and M. m. musculus. Karn RC, et al. PLoS One, 2010 Sep 9. PMID 20844586, Free PMC Article
    2. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, et al. Nat Neurosci, 2002 Feb. PMID 11802169
    3. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
    4. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
    5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    vomeronasal 1 receptor, E13
    Names
    vomernasal 1 receptor Vmn1r71

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145848.3 → NP_665847.1  vomeronasal 1 receptor, E13

      See identical proteins and their annotated locations for NP_665847.1

      Status: VALIDATED

      Source sequence(s)
      AC151720
      Consensus CDS
      CCDS20796.1
      UniProtKB/TrEMBL
      Q8VIC0
      Related
      ENSMUSP00000078116.4, ENSMUST00000079113.5
      Conserved Domains (1) summary
      pfam03402
      Location:41 → 253
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      10481429..10483465 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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