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    Ces1c carboxylesterase 1C [ Mus musculus (house mouse) ]

    Gene ID: 13884, updated on 11-Apr-2024

    Summary

    Official Symbol
    Ces1cprovided by MGI
    Official Full Name
    carboxylesterase 1Cprovided by MGI
    Primary source
    MGI:MGI:95420
    See related
    Ensembl:ENSMUSG00000057400 AllianceGenome:MGI:95420
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ee1; Es1; Es4; EsN; Ee-1; Es-4; Es-N; PESN; Ces-N
    Summary
    Enables carboxylic ester hydrolase activity. Acts upstream of or within response to bacterium. Located in extracellular space. Is expressed in several structures, including alimentary system; liver; nose; respiratory system; and urinary system. Orthologous to human CES1 (carboxylesterase 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward liver adult (RPKM 843.5) See more
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    Genomic context

    See Ces1c in Genome Data Viewer
    Location:
    8 C5; 8 44.99 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (93825643..93857911, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (93099015..93131283, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene carboxylesterase 1A Neighboring gene STARR-seq mESC enhancer starr_22328 Neighboring gene carboxylesterase 1B Neighboring gene STARR-seq mESC enhancer starr_22331 Neighboring gene predicted gene 45910 Neighboring gene STARR-seq mESC enhancer starr_22332 Neighboring gene carboxylesterase 1D

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables carboxylesterase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables carboxylesterase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables carboxylic ester hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity, acting on ester bonds IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables hydrolase activity, acting on ester bonds IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables sterol esterase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to cholesterol ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to low-density lipoprotein particle stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in epithelial cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in medium-chain fatty acid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cholesterol storage ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in organic substance catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in organic substance catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cholesterol efflux ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cholesterol metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of bile acid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of bile acid secretion ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in reverse cholesterol transport ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in lipid droplet IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lipid droplet ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    carboxylesterase 1C
    Names
    PES-N
    esterase 1
    liver carboxylesterase N
    lung surfactant convertase
    NP_031980.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007954.4NP_031980.2  carboxylesterase 1C precursor

      See identical proteins and their annotated locations for NP_031980.2

      Status: VALIDATED

      Source sequence(s)
      AA286207, AC121985, AI047526, AI116924, AI527022
      Consensus CDS
      CCDS22527.1
      UniProtKB/Swiss-Prot
      E9QQ07, O54936, P11374, P23953, Q8K125
      Related
      ENSMUSP00000034189.9, ENSMUST00000034189.17
      Conserved Domains (2) summary
      COG0657
      Location:121234
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      cd00312
      Location:25525
      Esterase_lipase; Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      93825643..93857911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)