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    Cd300c2 CD300C molecule 2 [ Mus musculus (house mouse) ]

    Gene ID: 140497, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cd300c2provided by MGI
    Official Full Name
    CD300C molecule 2provided by MGI
    Primary source
    MGI:MGI:2153249
    See related
    Ensembl:ENSMUSG00000044811
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    LM; MA; DIg; Igs; CLM4; CLM-4; DIgR1; Igsf7; Lmir2; Cd300c; Cd300d; AF25170; MAIR-II
    Expression
    Broad expression in spleen adult (RPKM 14.8), lung adult (RPKM 8.8) and 22 other tissues See more
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    Genomic context

    See Cd300c2 in Genome Data Viewer
    Location:
    11 E2; 11 80.57 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (114887595..114892706, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (114996721..115004261, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (114858083..114863194, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CD300C molecule Neighboring gene CD300 molecule like family member d Neighboring gene CD300 molecule like family member D4 Neighboring gene CD300 molecule like family member D2 Neighboring gene CD300 molecule like family member D5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transmembrane signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    CMRF-35-like molecule 4
    Names
    CLM
    CMRF35-like molecule
    Cd300C antigen
    Cd300D antigen
    MAIR-2
    dendritic cell-derived Ig-like receptor 1
    dendritic cell-derived immunoglobulin receptor 1
    immunoglobulin superfamily, member 7
    leukocyte mono-Ig-like receptor 2
    myeloid-associated immunoglobulin-like receptor 2
    myeloid-associated immunoglobulin-like receptor II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134158.1NP_598919.1  CMRF-35-like molecule 4 precursor

      See identical proteins and their annotated locations for NP_598919.1

      Status: VALIDATED

      Source sequence(s)
      AY048685
      Consensus CDS
      CCDS25616.1
      UniProtKB/Swiss-Prot
      Q7TSN2
      Related
      ENSMUSP00000090121.4, ENSMUST00000092464.10
      Conserved Domains (1) summary
      cd05716
      Location:30119
      Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      114887595..114892706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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