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    Musk muscle, skeletal, receptor tyrosine kinase [ Mus musculus (house mouse) ]

    Gene ID: 18198, updated on 21-Apr-2024

    Summary

    Official Symbol
    Muskprovided by MGI
    Official Full Name
    muscle, skeletal, receptor tyrosine kinaseprovided by MGI
    Primary source
    MGI:MGI:103581
    See related
    Ensembl:ENSMUSG00000057280 AllianceGenome:MGI:103581
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mlk; Mdk4; Nsk1; Nsk2; Nsk3
    Summary
    This gene encodes a member of the protein tyrosine kinase family. The encoded protein is a type 1 receptor-like protein located in muscle membrane that is activated by the heparan sulfate proteoglycan agrin released by nerve cells. The encoded protein activates signaling cascades responsible for multiple aspects of motor neuron and muscle development, including organization of the postsynaptic membrane, synaptic gene transcription, patterning of skeletal muscle, anchoring of acetylcholinesterase, and guidance of motor axons. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008]
    Expression
    Broad expression in limb E14.5 (RPKM 1.2), colon adult (RPKM 0.4) and 16 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    4 B3; 4 31.87 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (58285742..58377848)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (58285729..58377848)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35402 Neighboring gene sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_10355 Neighboring gene predicted gene, 30907 Neighboring gene STARR-seq mESC enhancer starr_10356 Neighboring gene STARR-seq mESC enhancer starr_10357 Neighboring gene STARR-seq mESC enhancer starr_10358 Neighboring gene microRNA 3095 Neighboring gene lysophosphatidic acid receptor 1 Neighboring gene arginine/serine-rich coiled-coil 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC117677

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables PDZ domain binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables Wnt-protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein tyrosine kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein tyrosine kinase activity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    enables protein tyrosine kinase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein tyrosine kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane receptor protein tyrosine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transmembrane receptor protein tyrosine kinase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in enzyme-linked receptor protein signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in enzyme-linked receptor protein signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in enzyme-linked receptor protein signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in long-term synaptic potentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in memory ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of motor neuron apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in multicellular organism development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within neuromuscular junction development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in neuromuscular junction development ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    NOT involved_in positive regulation of ERK1 and ERK2 cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of Rac protein signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of Rac protein signal transduction IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of Rac protein signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of motor neuron apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of neuron projection development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of peptidyl-tyrosine phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of protein geranylgeranylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of protein phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of protein phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of synaptic assembly at neuromuscular junction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of synaptic transmission, cholinergic ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within receptor clustering IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within receptor clustering IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in receptor clustering ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of synaptic assembly at neuromuscular junction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to electrical stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in skeletal muscle acetylcholine-gated channel clustering IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell projection ISO
    Inferred from Sequence Orthology
    more info
     
    located_in external side of plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in neuromuscular junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuromuscular junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuromuscular junction ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    muscle, skeletal receptor tyrosine-protein kinase
    Names
    muscle localized kinase 2
    muscle-specific kinase receptor
    muscle-specific tyrosine-protein kinase receptor
    NP_001032204.2
    NP_001032205.1
    NP_001032206.1
    NP_001032207.1
    NP_001159468.1
    NP_035074.2
    XP_006537722.1
    XP_006537724.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037127.2NP_001032204.2  muscle, skeletal receptor tyrosine-protein kinase isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AL805969, AL807748
      Consensus CDS
      CCDS51182.1
      UniProtKB/TrEMBL
      E9PVV8, Q32SD4
      Conserved Domains (6) summary
      cd05050
      Location:593882
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:239306
      Ig; Immunoglobulin domain
      cd07469
      Location:338482
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:599880
      Pkinase_Tyr; Protein tyrosine kinase
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    2. NM_001037128.1NP_001032205.1  muscle, skeletal receptor tyrosine-protein kinase isoform 2

      See identical proteins and their annotated locations for NP_001032205.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant lacks an alternate, in-frame segment in the coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
      Source sequence(s)
      AY955297, BC100342, U37709
      UniProtKB/TrEMBL
      J3QPS3, Q32SD3
      Conserved Domains (6) summary
      cd05050
      Location:578867
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:239306
      Ig; Immunoglobulin domain
      cd07469
      Location:323467
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:584865
      Pkinase_Tyr; Protein tyrosine kinase
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    3. NM_001037129.1NP_001032206.1  muscle, skeletal receptor tyrosine-protein kinase isoform 3

      See identical proteins and their annotated locations for NP_001032206.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks two alternate, in-frame segments in the coding region, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
      Source sequence(s)
      BC100342, U37709
      Consensus CDS
      CCDS38770.1
      UniProtKB/TrEMBL
      F6WVU1, Q497X0
      Related
      ENSMUSP00000136696.2, ENSMUST00000177951.8
      Conserved Domains (6) summary
      cd05050
      Location:570859
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:239306
      Ig; Immunoglobulin domain
      cd07469
      Location:323466
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:576857
      Pkinase_Tyr; Protein tyrosine kinase
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    4. NM_001037130.1NP_001032207.1  muscle, skeletal receptor tyrosine-protein kinase isoform 5

      See identical proteins and their annotated locations for NP_001032207.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) lacks three alternate, in-frame segments in the coding region, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
      Source sequence(s)
      BC100342, U37708
      Consensus CDS
      CCDS18210.1
      UniProtKB/TrEMBL
      I7GSQ5, Q32S49
      Related
      ENSMUSP00000099957.4, ENSMUST00000102893.10
      Conserved Domains (6) summary
      cd05050
      Location:560849
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229296
      Ig; Immunoglobulin domain
      cd07469
      Location:313456
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:566847
      Pkinase_Tyr; Protein tyrosine kinase
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    5. NM_001165996.1NP_001159468.1  muscle, skeletal receptor tyrosine-protein kinase isoform 6

      See identical proteins and their annotated locations for NP_001159468.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the central coding region, and differs in the presence and absence of exons in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (6) has a distinct C-terminus and is shorter than isoform 1.
      Source sequence(s)
      AL805969, AL807748
      UniProtKB/TrEMBL
      Q1XD56
      Conserved Domains (4) summary
      cd00096
      Location:229296
      Ig; Immunoglobulin domain
      cd07469
      Location:313457
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    6. NM_010944.2NP_035074.2  muscle, skeletal receptor tyrosine-protein kinase isoform 4

      See identical proteins and their annotated locations for NP_035074.2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) lacks two alternate, in-frame segments in the coding region, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
      Source sequence(s)
      BC100342, U37709
      Consensus CDS
      CCDS18211.1
      UniProtKB/Swiss-Prot
      Q61005, Q61006, Q61987, Q61988
      UniProtKB/TrEMBL
      K3W4P7, Q32S50
      Related
      ENSMUSP00000081625.6, ENSMUST00000084578.12
      Conserved Domains (6) summary
      cd05050
      Location:568857
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229296
      Ig; Immunoglobulin domain
      cd07469
      Location:313457
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:574855
      Pkinase_Tyr; Protein tyrosine kinase
      cl11960
      Location:135201
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      58285742..58377848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006537659.4XP_006537722.1  muscle, skeletal receptor tyrosine-protein kinase isoform X1

      See identical proteins and their annotated locations for XP_006537722.1

      UniProtKB/TrEMBL
      J3QPS3
      Conserved Domains (4) summary
      cd05050
      Location:588877
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd07469
      Location:333477
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:246306
      Ig_3; Immunoglobulin domain
    2. XM_006537661.4XP_006537724.1  muscle, skeletal receptor tyrosine-protein kinase isoform X2

      UniProtKB/TrEMBL
      F6WVU1
      Conserved Domains (4) summary
      cd05050
      Location:580869
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd07469
      Location:333476
      CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:233316
      Ig; Immunoglobulin domain