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    Zfp934 zinc finger protein 934 [ Mus musculus (house mouse) ]

    Gene ID: 77117, updated on 23-Jun-2021

    Summary

    Official Symbol
    Zfp934provided by MGI
    Official Full Name
    zinc finger protein 934provided by MGI
    Primary source
    MGI:MGI:1924367
    See related
    Ensembl:ENSMUSG00000074865
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    6720457D02Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 2.3), placenta adult (RPKM 1.7) and 22 other tissues See more
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    Genomic context

    See Zfp934 in Genome Data Viewer
    Location:
    13; 13 B3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (62664609..62727170, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (62516795..62579321, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (62618157..62659959, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 935 Neighboring gene predicted gene, 21145 Neighboring gene protein C1orf43 homolog Neighboring gene predicted gene, 24095 Neighboring gene predicted gene, 38639 Neighboring gene RIKEN cDNA 6720489N17 gene Neighboring gene predicted gene, 36298

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001162911.2NP_001156383.1  zinc finger protein 782 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC122357, CT030240
      Consensus CDS
      CCDS88472.1
      UniProtKB/TrEMBL
      K7N6H3
      Related
      ENSMUSP00000099083.6, ENSMUST00000101547.12
      Conserved Domains (4) summary
      COG5048
      Location:178471
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:359379
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:444
      KRAB; KRAB box
      pfam13465
      Location:147171
      zf-H2C2_2; Zinc-finger double domain
    2. NM_001360915.1NP_001347844.1  zinc finger protein 782 isoform 3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an exon, which results in a frameshift, compared to variant 1. The encoded isoform (3) has a shorter distinct C-terminus and lacks zinc finger domains.
      Source sequence(s)
      AC122357, BY719365
      Consensus CDS
      CCDS88471.1
      Related
      ENSMUSP00000152804.2, ENSMUST00000222746.2
      Conserved Domains (1) summary
      pfam01352
      Location:444
      KRAB; KRAB box
    3. NM_175252.5NP_780461.3  zinc finger protein 782 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC122357, CT030240
      Consensus CDS
      CCDS88470.1
      Related
      ENSMUSP00000152492.2, ENSMUST00000220648.2
      Conserved Domains (3) summary
      COG5048
      Location:146439
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:327347
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:115139
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      62664609..62727170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017315637.3XP_017171126.1  zinc finger protein 782 isoform X1

      Conserved Domains (4) summary
      COG5048
      Location:196489
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:377397
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:2262
      KRAB; KRAB box
      pfam13465
      Location:165189
      zf-H2C2_2; Zinc-finger double domain
    2. XM_030247464.1XP_030103324.1  zinc finger protein 782 isoform X3

      Conserved Domains (3) summary
      COG5048
      Location:146439
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:327347
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:115139
      zf-H2C2_2; Zinc-finger double domain
    3. XM_030247463.2XP_030103323.1  zinc finger protein 782 isoform X2

      Conserved Domains (4) summary
      COG5048
      Location:183476
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:364384
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:949
      KRAB; KRAB box
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
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