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    Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 [ Mus musculus (house mouse) ]

    Gene ID: 72429, updated on 23-Jun-2021

    Summary

    Official Symbol
    Dnajc25provided by MGI
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member C25provided by MGI
    Primary source
    MGI:MGI:1919679
    See related
    Ensembl:ENSMUSG00000070972
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010109C08Rik; 2010203O07Rik
    Expression
    Ubiquitous expression in ovary adult (RPKM 8.6), adrenal adult (RPKM 6.2) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Dnajc25 in Genome Data Viewer
    Location:
    4; 4 B3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (58995215..59025573)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (58994799..59025573)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (59016065..59036270)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene zinc finger with KRAB and SCAN domains 16 Neighboring gene prostaglandin reductase 1 Neighboring gene guanine nucleotide binding protein (G protein), gamma 10 Neighboring gene shortage in chiasmata 1 Neighboring gene predicted gene, 35527

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 25
    Names
    DnaJ (Hsp40) homolog, subfamily C, member 25

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033165.3NP_001028337.2  dnaJ homolog subfamily C member 25 precursor

      See identical proteins and their annotated locations for NP_001028337.2

      Status: VALIDATED

      Source sequence(s)
      AI480957, AK136359, BI133646, BM951172, BX512063
      Consensus CDS
      CCDS18216.2
      UniProtKB/Swiss-Prot
      A2ALW5
      Related
      ENSMUSP00000092680.4, ENSMUST00000095070.4
      Conserved Domains (1) summary
      pfam00226
      Location:48118
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      58995215..59025573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006538276.5XP_006538339.1  dnaJ homolog subfamily C member 25 isoform X1

      See identical proteins and their annotated locations for XP_006538339.1

      UniProtKB/Swiss-Prot
      A2ALW5
      Related
      ENSMUSP00000118048.3, ENSMUST00000152199.9
    2. XM_006538275.4XP_006538338.1  dnaJ homolog subfamily C member 25 isoform X1

      See identical proteins and their annotated locations for XP_006538338.1

      UniProtKB/Swiss-Prot
      A2ALW5
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